Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09510 ATGGAGGGTGGAGATGAAGCTCTGGAGATGGTAGTTGACTCAAAAGACATGCAACAGCAGAGTAAAGCCTTCGACAAACTCACTGACCGCGTGGAAGATCGCCAGCTTGATTCCACTCGCGTTCAAGAAGCCATGGCTTCCATTGCTGCTTCTGCTGAAGCCGATTGGAATGCCATGCGTTTGAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATTGCAAACGAACTAGAGTTGGACAAAAAGGTGGCTGAAAGAACCTTGCGTGAGCATAAAGGTGATGCTGTTGCTGCCATTCGTCATTTGCTTCACTAG 333 0.4655 MEGGDEALEMVVDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMRLREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09510 110 Coils Coil 80 100 - -
Vifa1g09510 110 Pfam HYPK UBA domain 69 109 IPR044034 -
Vifa1g09510 110 CDD UBA_HYPK 69 109 IPR038922 -
Vifa1g09510 110 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g09510 110 Gene3D - 70 108 - -
Vifa1g09510 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09510 Vifa-Chr1 1514259974 1514261869 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09510 - - zju:107418997 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09510 1 1514259974 1514261869 Vifa1g09510 1 1514259974 1514261869 ECH