Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09505 ATGACAATCACAATGTCTTTTCATCTCTTCTTCCTCTTTTTCACAATGCCATTCCTTGTATTTTGTGATGTCCAAATGCCTTCAGGTTCTTCAACACAGATTCTTAGTTCTTTCCATGAAGACAAAAATGTGTCCATAACCATAACAGTGTCAGAAAAAGAAGATCATGCTCATTCCATCTCTACAAACTTTTGGTTTCATGGTTCTTGCACAAAAAGAGACATAAGCATCTCACAAAGCAAAGGTTCGACTTCTGGAATTCCACAATACATAGTGCAAATCGTAAACACCTGTGTTTCTGGATGTGCACCTCATGAAATCCATCTCCATTGTGGCTGGTTTGCTTCTGCAAGAATAATCAATCCTAGATTGTTCAAAAGACTCTCTTATGATGATTGTTTGGTGAATGGTGGAAAACCTTTGAGCTCTAGCCAGATTATTAGATTCACTTATTCTAATTCCTTCATGTACCCTCTTTCATTCAAGTCTGCTACATTTTGCTGA 504 0.373 MTITMSFHLFFLFFTMPFLVFCDVQMPSGSSTQILSSFHEDKNVSITITVSEKEDHAHSISTNFWFHGSCTKRDISISQSKGSTSGIPQYIVQIVNTCVSGCAPHEIHLHCGWFASARIINPRLFKRLSYDDCLVNGGKPLSSSQIIRFTYSNSFMYPLSFKSATFC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09505 167 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 28 165 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09505 Vifa-Chr1 1512775352 1512776018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09505 - - gmx:100796799 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09505 1 1512775352 1512776018 Vifa1g09505 1 1512775352 1512776018 ECH