Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09502 ATGGAAACTACAAGGAAATTGGGTGTAGCAATGGATTTCTCTCCATGCAGCACCAAGGCATTGCAATGGATGGTGGATAATATTGCTAAAGAAGGTGATACCATCTTTCTTATTGTCATTAATCCAGAAGAGTATGAACAAGGTGAAATGCAGCTTTGGGCAGTTACAGGTTCACCTATCATTCCTCTTGCCGAGTTCTCTGACCCATCACTATCAAAGAAATATGGAATCAATCCTAACCTAGAAGTAATTCAGATTTCCACAACTGCCATGGAACAGAAAAAGGTTGATGTACTAGTAAAGATCTATTGGGGAGATGCTCGGGAGAAATTATGTGAATCAGTTGAACACATACCTCTTGATAATCTTACTATGGGAAACCGAGGCCTCGGAACCCTTAGAAGGGCCATAATGGGAAGTGTTAGCAACTATGTAGTGAATAATGCTGCATGTCCCGTTACTGTGGTGAAGACTTCAGACCAAAACCATTAA 492 0.4085 METTRKLGVAMDFSPCSTKALQWMVDNIAKEGDTIFLIVINPEEYEQGEMQLWAVTGSPIIPLAEFSDPSLSKKYGINPNLEVIQISTTAMEQKKVDVLVKIYWGDAREKLCESVEHIPLDNLTMGNRGLGTLRRAIMGSVSNYVVNNAACPVTVVKTSDQNH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09502 163 Gene3D HUPs 3 163 IPR014729 -
Vifa1g09502 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 157 - -
Vifa1g09502 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vifa1g09502 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Vifa1g09502 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Vifa1g09502 163 CDD USP_Like 6 156 - -
Vifa1g09502 163 PANTHER IMP2'P 1 161 - -
Vifa1g09502 163 FunFam Universal stress protein family protein 2 160 - -
Vifa1g09502 163 Pfam Universal stress protein family 5 157 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09502 Vifa-Chr1 1512468710 1512469722 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09502 - - gmx:100816534 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09502 1 1512468710 1512469722 Vifa1g09502 1 1512468710 1512469722 ECH