Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09484 ATGAACTTGAACACGAGCAGTGAGGTTGAAACTCGTACCAAGCTTGACGACCTCTGTAACTTCGATAAAAAAGGCCTATTTGATCTCGGCCATCCTCTTGTTAACCGCATCGCCGAAAGCTTCGTCAAAGCCGCCGGAATCGGAGCCGCTCAAGCCTTCTCTCGCGATGCTTACTTTTCAGCCACTGACGGTACCACAACCGATAACAATGGCGTCAAAGCTTCTTTAGATGGTTCAGCCACCGGAAAACGCCGTTTGCCGGGAATTAGAGGAGAGACCAATAACAAATCTCTTGAGGCTATGGTGATTAATGCTGGGAAAGAGTCCTTACAATGGGGAGTGGCTGCAGGATTATATTCAGGTCTCACATATGGACTGAAGGAGGCTCGTGGTGCTCATGACTGGAAAAACAGTGCAGTTGCTGGAGCAGTCACTGGGGCCACCCTTGCACTTACCATGGAAGACTCCACTCATGAACATGTTGTTCAATTTGCTATCACTGGAGCTGCAATCTCCACTGCTGCGAACCTTCTCACTGGGATTTTCTAA 549 0.4882 MNLNTSSEVETRTKLDDLCNFDKKGLFDLGHPLVNRIAESFVKAAGIGAAQAFSRDAYFSATDGTTTDNNGVKASLDGSATGKRRLPGIRGETNNKSLEAMVINAGKESLQWGVAAGLYSGLTYGLKEARGAHDWKNSAVAGAVTGATLALTMEDSTHEHVVQFAITGAAISTAANLLTGIF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09484 182 PANTHER TIM23 21 179 IPR045238 GO:0022857
Vifa1g09484 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 34 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09484 Vifa-Chr1 1506821053 1506822819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09484 - - gmx:100800540 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09484 1 1506821053 1506822819 Vifa1g09484 1 1506821053 1506822819 ECH