Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09408 ATGAACATAAACGCCTTCACTTCCATAAACACACAACTGTTACCCTTTCTCCCACTCGCCCCACACGCGTCCTCACAACGCGCCACCCTCTCCCTCACTTCAACTCCTCTTCTCTCTTTTCCAAAACCCTGCCAACGACTCTCTCTATCCGCCATGTCTTCTTCTCCGACCATCTTTACCGAACTCAGCGACGAATCTCACTTCGACTCTCTCCTCTCTCCCGACGATCACATCTCCATTTGCGGCTTCGGCTCTCTCCTCTCCGAGCGAAGCGCAAGAAGCACTTTCCCCAATTTGCTCAATTTCAGAATCGCTAAGTTGAATCACTTCCGTCGTGTTTTCGCTCATGTTGCTCCTGTTTTCTTCGAACGCGGCATTGCCAAGCCAGAAACTATGGAGATTTCAAGTTTGAGTGTGGAGGCATGTGAAGGAGAATCTCTTGTAGTAACGGTTTTTGAAATAACAAAATCTGAGATTCCAGATTTCATCAAGAGGGAGGTTGAATTTCGGTTTCTTGCTGTTCTTCCTGACACTCTTGATGGGAAATCTTATGACATTCCGGCGGTCCTTTGTGCTCGATATAGTGATGAGGAATTTTTCAACATTAGATGTAAAGGAAACAAAGAAATTTTGTTTCAGCAATATGGACGGTGGAATATTGATAAAATTTGGAGAGATGATGTTTTTCCTTGCCGTGTCTATCTTCGACACTGTGTACTGGCAGCAAAGAATCTTGGTGACACAGCCTACAACAATTTCCTGGATCATACCTACCTTGCTGACCGCAAAACAACCATTCGCGAGTACTTGACATCGGCAGGTTCTGGCATAATGGAAGAAGAACCACCTGAATCCCTCAAGTTCCGCTATGGCGGATGA 879 0.4573 MNINAFTSINTQLLPFLPLAPHASSQRATLSLTSTPLLSFPKPCQRLSLSAMSSSPTIFTELSDESHFDSLLSPDDHISICGFGSLLSERSARSTFPNLLNFRIAKLNHFRRVFAHVAPVFFERGIAKPETMEISSLSVEACEGESLVVTVFEITKSEIPDFIKREVEFRFLAVLPDTLDGKSYDIPAVLCARYSDEEFFNIRCKGNKEILFQQYGRWNIDKIWRDDVFPCRVYLRHCVLAAKNLGDTAYNNFLDHTYLADRKTTIREYLTSAGSGIMEEEPPESLKFRYGG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09408 292 PANTHER OS05G0358400 PROTEIN 47 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09408 Vifa-Chr1 1487784766 1487786485 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09408 - - gmx:100781602 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09408 1 1487784766 1487786485 Vifa1g09408 1 1487784766 1487786485 ECH
Vifa4g03989 4 1274766743 1274767587 Vifa1g09408 1 1487784766 1487786485 PCT