Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09388 ATGGGCGAAGGACGTGGATTCGAGATCGCTCAAGCTAGGCTAGGTCCTGGAAGACTGCACCATTATTTGGCCAAGTGTCGAGTCGAACTAGAGAAGACTAGATTACTTGTGTTGGAAGCCGCAGACCAGCTTGATCGATATGGAAACAAAAAAGCTCGAGGCATAATCGCAATGGCTAAGGTAGCTGCACCACAAATGGGATTAATGGTACTTGACATGGCGATCCAGTTCACTTGGGTACCATCGGCAAGGCTAGAATTAGAAATACAAAGAGCCAAGCTTTGA 285 0.4702 MGEGRGFEIAQARLGPGRLHHYLAKCRVELEKTRLLVLEAADQLDRYGNKKARGIIAMAKVAAPQMGLMVLDMAIQFTWVPSARLELEIQRAKL 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09388 94 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 2 77 IPR036250 GO:0016627
Vifa1g09388 94 Pfam Acyl-CoA dehydrogenase, C-terminal domain 20 77 IPR009075 GO:0016627
Vifa1g09388 94 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 21 77 - -
Vifa1g09388 94 Gene3D - 17 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09388 1 76 Acyl Lipid Metabolism Gene Families AT3G06810 55.752 5.72e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09388 K00249 - atr:18431303 117.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09388 1 1483824814 1483825472 Vifa1g09388 1 1483824814 1483825472 ECH