Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09346 ATGGACGAAACCATATCAAGAATAGCAACGGAGATCGAAGACCTCCGTGAAAACCACCGTCCCGACAACCCACAGCCTCTCTCCGAACAATCCCTCTCAGATCTCCAAAAACTCCTCAAAAACCCGCAAGCCCTAGAAGCACTCTATGACGCCGTTTCACCTTCCCACCTCATCCCACCCATCGCCACCGCAATGGACTCATCTCCAACTCCTCACTCTCTCCTCGCTTCTCACGTTTTCCTCTCTTTTCTCCTCTCCCCAGACGCTCCCGTTTTCACTCTCTTTACTCCTCTTTCCTTTCTCTCCTTCCTCCGTTCAATTCGCCGCTCTTTCAAAAACAACAACGCTTCCAACAACTCTCAGCAGCGCCCCAAGCGAAAACGCGGTTCCAAAAACAAAAAAAACACAGAAAATGATGAAGATGAACCTAATTCCACAAACTCTCAACATAATCTCGATGTTAGGGTTTTGCTTTCTCTTTTCGAGAAGCTTGTTAGTGTTATGTCGTTGATTCACCTCGATCGTTTCCCTGAAAGTCTCAAATCGTTGATTCAGACTATTTCAGAGGTTCCTTTGACAGCTATTGAATCGTGTAGAGATGAGTTTCAGTACAGTAAATTGGTTGCTTTATGCGCGAGGATTCTGAAAGAGGTTTTGAAACCGGAGCACGGTGAGCCTTCCGAGACTGCTGCTGAGGTTTTGAAGTCTCTGTCTCCGCTTGCTTCTATGCCGAAATCTACAGTAAGGACTTTTGCTGTTGGTTTTGTCACGAGTCTTGCTAGGGATTCTGTTGGTGTGAGGAAAGCTTTGGTTAATTTTCCTAGGTATTTGGCGATTAAGGCGCCGGATAAAGCTGAACCTAGAGGGTTGTCTGTGGAGTTTATCATGGAGGTTGTTAGGGTTATGGAGTTGGAGGATCAAATTGGGTTTGTGAAGTATGTTGTGAAGATGACTCAAGGAAAAGGCAATTTAAGGCTTTTGGGGGTTGATCTTATTTTGAATCTGGTAACTACGTTGAAGGATCCTTTAGGGGTGAATTCCATTGAAGAAGAAGGAGAAGCGAAAGAGGCGTGGGGTATGTGGTGTTTGGAGGCGTTGGTAAAGCGTTGTTCGGATGTTAGTGCTATGACTCGAGCTCGGGCGTTGTCGAATTTAGCGCAGGTTGTTAAGCTTCTATCAGGTAGTGATAGGGCTAGTGTGGTTTTGAAAAAGTTTATGGGTTTTGGCGATGGGAATGTTGCGAGTGTGGGAGGAAAGGGAATCAATGAGATGCTCAGGAGAAGGTGTGTGGATGAGAAGGCGGTTGTGAGAAAAGCTGCTCTTTTGCTTGTTACTAAATTGACTGCTCTGCTTGGAGGTGCTATTGATGAAGTGGTGCTTAAGACAATGGGAATGGCTTGTTCCGATTCACTCCTTAGCATCCGGAAAGCGGCACTTGAAGCTCTTTCTGAGGTTTTCAAAACATTCTCAGCTGAAAAGGTAATAACTGAGTGGCTACACTCAGTCCCTCGTCAAATAGCTGATAATGAAACTAGCATCCAAGAAGAATGCGAGAATATGTTTGAAGAACTTGTTCTGGACCGAATATCTAGAGGCGCAGCTTCTTCCTCTTCATATATTGGATCTACGTCTGGTAGCAAAGAGAAAGAAAAAGGGGTAGACGAAGAGATGGAGATGTCTTTCCCTCCAGGAATTCTCTATCTCCTGAGAGAGATTTGCAATGGAGAGAATATAATCAAGGTGTCCGAGTCTATCTGGCTGAACCATAGCAAGCCGATAGACAAGTGGACTGCCCCACCAGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTCCTTCCAAAAGCAGTGGACTGGGATTTTCTTCATCATCATTGGCAGCTTCTTGACAAACATAAAGTGAATGGTGAGTTTCAAAGTCCATTTGTACAGAAAAATGCAACTGGAGAGGAAGAAAGCATAGAATGCAACAATGTTGCCTGGGCTAGTGACCGAGTTTTCCTATTGCAAACAATCTCTAATGTTTCTATTGAGCTGCCACCTGAACCTGCTGCTGATTTGGCTCACAACTTACTCAAAAGGGTTGAAAAATTCAACATGCATTCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTATGCAAGCGAAAAGCTTCAAATGACATGGAGGCAGAAGCATTAGTCTTGAAATGGGTTCACCAAGTTCTGTCTAGAGCTTCTCAAATAATAGAAACTTTTATTTCAGATAATTCAGAGCAAGATGCTGAAACTGGCTTCTTTACTCCACCTAGAAGTGGGCCTAGTAAAGGTAGGAAATCAGTACGAAAGCGCAAATCATTGTCAAAAGCAATCACGGCTATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCAACTGCTGATATGAGTGCTGTAACTCCACTATTGCACACTATCATCACCTCTGGGAATTCAGGCCCGAAATTAAATAAGCTACCCGGCCCTGCAACCACTCTACAACAAGAAGCTCCATCTTTTTACATTCAAGGGTGGCTGGCCATGGGCAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAAAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGCGATGCTGCAGCTCTTCGCAATAATATTGTGGTCATGATGACAGACTTCTGTGTTCGGTACACTGCTCTTATTGATGGTTATATAACCAAGATCACAAGGTGTCTCTTAGATCCCTGTGAACTTGTGAGAAGGCAAACGTTCATATTGCTATCCAGACTGTTGCAGAGGGACTATGTGAAGTGGAGAGGAGTGCTATTTCTTCGTTTCCTTTTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGCTAGCAGATTTCCTCTTTGGAAATATTCTGAAAGTCAAGGCTCCTCTCTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTTTGAATGACTGCCATGCCCATATTGGACATCGTGAGTCCGGTGAATCACGAAAGGACAGCCAACTTTTCTCCATCAGGGGTGCTGATGAAAAATCAAGGTCTAGAAGAATGCATATTTATGTTTCTCTACTAAAGCAAATGGCTCCGGAGCATCTTCTCGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTTAATATAGAAGATGCAACTGGACAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCATTCAATCCACTCGTGGATCATCTGAGTCGGCAGACTTAGAAGAAGAAGGGGGAGAAAATGGATCTTCAACTCGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTCATTCAAAACACTATACCCATCTTCATAGAGTTGAAACGTCTACTGGAAACCAAGAACAGTCCCCTCATAGGTTCTCTCATGGAATGCCTACGAGTTCTTCTCAAGGACTACAAGAATGAGATCGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAACTGATCTATGACATGCAGAAATATGAAGCAGCAAGAGCTAAAGCAACAGTTGCTGAGGCTGTAGCCTCCATGCCTAAACCAGGTGCAAATCAATCACCTGGTGATTCTAAGAATCTGCCCAAGGAACAAGGACAAACAGATGAACAAAATGAGGACAATGACCAGTTTCCAAGTGGTTCAAAAATTGCTTCGGCGATGGCAGATGCTGCAGCTGCAGCTACAGCTCGTTCTGTGCTCAAGGAAATTAACAAGGGGACAGTGACACCACAGCTTAGTTCTTTGAATGTTCCGAAAGTCAAGTCTTTTACAGGTGAGTGCATATCTAGAGGTGATAAGCGTCTGGATGTCATAAAATCTTTGAAGAAAAAACATGCTTTTGATTCTGATGACGAAAACTAA 3909 0.4341 MDETISRIATEIEDLRENHRPDNPQPLSEQSLSDLQKLLKNPQALEALYDAVSPSHLIPPIATAMDSSPTPHSLLASHVFLSFLLSPDAPVFTLFTPLSFLSFLRSIRRSFKNNNASNNSQQRPKRKRGSKNKKNTENDEDEPNSTNSQHNLDVRVLLSLFEKLVSVMSLIHLDRFPESLKSLIQTISEVPLTAIESCRDEFQYSKLVALCARILKEVLKPEHGEPSETAAEVLKSLSPLASMPKSTVRTFAVGFVTSLARDSVGVRKALVNFPRYLAIKAPDKAEPRGLSVEFIMEVVRVMELEDQIGFVKYVVKMTQGKGNLRLLGVDLILNLVTTLKDPLGVNSIEEEGEAKEAWGMWCLEALVKRCSDVSAMTRARALSNLAQVVKLLSGSDRASVVLKKFMGFGDGNVASVGGKGINEMLRRRCVDEKAVVRKAALLLVTKLTALLGGAIDEVVLKTMGMACSDSLLSIRKAALEALSEVFKTFSAEKVITEWLHSVPRQIADNETSIQEECENMFEELVLDRISRGAASSSSYIGSTSGSKEKEKGVDEEMEMSFPPGILYLLREICNGENIIKVSESIWLNHSKPIDKWTAPPGAWFLLSEVSVFLPKAVDWDFLHHHWQLLDKHKVNGEFQSPFVQKNATGEEESIECNNVAWASDRVFLLQTISNVSIELPPEPAADLAHNLLKRVEKFNMHSTEVDAHVKALKTLCKRKASNDMEAEALVLKWVHQVLSRASQIIETFISDNSEQDAETGFFTPPRSGPSKGRKSVRKRKSLSKAITAIYTIGSLVIVCPTADMSAVTPLLHTIITSGNSGPKLNKLPGPATTLQQEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSDAAALRNNIVVMMTDFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAVFVLNDCHAHIGHRESGESRKDSQLFSIRGADEKSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKEIRIQSTRGSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAARAKATVAEAVASMPKPGANQSPGDSKNLPKEQGQTDEQNEDNDQFPSGSKIASAMADAAAAATARSVLKEINKGTVTPQLSSLNVPKVKSFTGECISRGDKRLDVIKSLKKKHAFDSDDEN 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09346 1302 PANTHER CONDENSIN 42 1279 IPR026971 GO:0007076
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 1085 1105 - -
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 132 146 - -
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 756 778 - -
Vifa1g09346 1302 SUPERFAMILY ARM repeat 43 1233 IPR016024 -
Vifa1g09346 1302 Gene3D - 362 529 IPR011989 -
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 113 148 - -
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 535 554 - -
Vifa1g09346 1302 Pfam non-SMC mitotic condensation complex subunit 1 879 1070 IPR032682 -
Vifa1g09346 1302 Coils Coil 1150 1170 - -
Vifa1g09346 1302 MobiDBLite consensus disorder prediction 1194 1229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09346 K11491 - gmx:100781242 1825.83