Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09301 ATGGCACTTAGACCCATTGATAACGCTCTTCCAACAATAACCCAAGAAAGACCCAAAAAACAACCTAGAATCGCTGTCGCAACTCACAAACAACAACCTCCTACTGCTAATGACGAAAATCAAGTCCCGTCGGAACCCACCGTTGATTATATTTCATCCGACAACCTTAAACCCATGTCGGATCCGGAAGCTCAGATTCAAAGTTTGATTGAAGATTTGGATTCGAAAAATTGGGTCGAAGTTTGTGAATCGTTGAATGATGTTAGGCGATTTGCATTGTACCACTCTTCTCTTCTATTACCCATTTTGGATAAAATTTTGTTGGTGGTGGTGAAGTCAATGAAGAACCCTCGTAGTGCTTTATGCAAAACCTCTATTATGGCTGCTTCTGATATTTTCAATGCTTTTGGTGACAAATTGTTTGATCCATCTACTTCTGATGCGTTTGAGGATTTGCTGTTGCAGCTGCTGCTGAAAGCTTCTCAAGATAAAAGGTTTGTATGTGAAGAAGCTGAGAGAGCACTTGGATCAATGGTGGGTTCCATGACACCTCTTTCATTGCTTCAGAAACTAAGGGTTTCTGTGAGTCATAAGAACCTTAGGATCAGAGCTAAAGCTGCTGTTTCTCTATCCAAATGTGTCTCCAAGATGGGAAGTGATGAAATGGAGGAGTTTGGGATGGAAAAGTTGATTGAAGTGGCAGCTGATTTAGTGAATGATAGGCTTCCAGAGGCAAGAGATGCAGCAAGAGCTATAGCAACTTCAGTGTATGAGGCAATCATTAAGGATGTGGAGGTGGAAGAGAAGATGGAAGCGTGGCAGAGCTTTTGCTTCTCTAAGTTAACACCAATTAATGCCATTTCGATTTTAAAAATTGTTAAAGCTTAG 888 0.4099 MALRPIDNALPTITQERPKKQPRIAVATHKQQPPTANDENQVPSEPTVDYISSDNLKPMSDPEAQIQSLIEDLDSKNWVEVCESLNDVRRFALYHSSLLLPILDKILLVVVKSMKNPRSALCKTSIMAASDIFNAFGDKLFDPSTSDAFEDLLLQLLLKASQDKRFVCEEAERALGSMVGSMTPLSLLQKLRVSVSHKNLRIRAKAAVSLSKCVSKMGSDEMEEFGMEKLIEVAADLVNDRLPEARDAARAIATSVYEAIIKDVEVEEKMEAWQSFCFSKLTPINAISILKIVKA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09301 295 SUPERFAMILY ARM repeat 60 263 IPR016024 -
Vifa1g09301 295 MobiDBLite consensus disorder prediction 28 46 - -
Vifa1g09301 295 Pfam CLASP N terminal 102 258 IPR024395 -
Vifa1g09301 295 PANTHER CLASP 28 222 - -
Vifa1g09301 295 Gene3D - 36 270 IPR011989 -
Vifa1g09301 295 SMART TOG_3 55 280 IPR034085 -
Vifa1g09301 295 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09301 Vifa-Chr1 1472832023 1472833312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09301 - - cam:101514830 481.485