Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09290 ATGTCAGGGGTTTGGGTGTTCAAGAACGGCGTGGTTCGTCTAGTGGACGGCGCAGAGGCGATGGAGGGCGGACGTCAAGGGTCAGGCGGACGGCGTAAGGTGTTGGTCCACACCGCGAGCAATGAGATCATCAACTCTTACGCTGTCTTAGAGCGGAAGCTTAGTTCTTTGGGATGGGAGCGTTACTACGATGACCCTGACTTGCTTCAGTTCCACAAGCGCTCCACCGTTCATCTCATCTCTCTCCCTTTGGAATTCAATAGGTTCAAGTCCATGCACATGTATGACATCGTTGTCAAGAACAAGAACTCCTTTGAAGTTAGGGACATGATGATGTAG 339 0.5133 MSGVWVFKNGVVRLVDGAEAMEGGRQGSGGRRKVLVHTASNEIINSYAVLERKLSSLGWERYYDDPDLLQFHKRSTVHLISLPLEFNRFKSMHMYDIVVKNKNSFEVRDMMM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09290 112 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1 1 110 IPR039274 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09290 Vifa-Chr1 1470859353 1470859691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09290 - - tcc:18603489 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09290 1 1470859353 1470859691 Vifa1g09290 1 1470859353 1470859691 ECH
Vifa4g03949 4 1264316193 1264316519 Vifa1g09290 1 1470859353 1470859691 PCT