Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09261 ATGGAAGATAATAATACCGAGCTTGAAGAAGGAGAAGCTTGCTATTATAAGGATGATGATGATGACAACACTGACCTTGATTCTCTCTCTTACATTGACGAGAGGATTCAACATGTTTTGGGCCATTTTCAAAAAGATTTTGAAGGTGGTGTTTCTGCTGAAAATTTGGGTTCAAAATTTGGGGGCTATGGTTCCTTTCTACCTACCTATGAACGCTCTCATCCAAAGACTCCACAAGGAAACCAAAGCTCACCACAATCTCCTATTGTTCTCCACAAGGAGGCTGTGCCTGATAACAGAAAAGTGCCCTCAAATATGGCTCCTGCTGCGAGGATTGGAAATGCTTCTCATAGTTCAAATTCGTTTCGTGATGTAAGGGCAGCTTCAATAGATGTCTCAGTGAAGAAAGACAGTGGAATTTCTTCCAATGATGTAGCTGGGAGGTGCACTTTGAAAGATGACACTCCAATTAAGAAGGGAAATTCAACTGACCAAAGACCGCTGAAGTTTAGACTCAAAATGAATTCCAACTTCTTAGCGCAAAAGACTGCAGAAATTTATAGTGGCCTTGGGCTTGATGACTCCCCGACTTCCTCAATGGAGAACAGCCCTGTGGAAAGTGAAGGCACTCCTCCACTCCCACCTCCACCTCCACCTCCACCTGTATCTAAAGCGAAAGCTGAAGGTTCTGCAATTGAAATTATTAAGGCTATGACTTCCTTTGCGATCCCTGGAGGTGTCTTACTATCACCTCTACCTGAAAGTTTGCTCTTCTCAGTGAAAAACAAAAAAGATCATGGAGATGTCAGATATATGTCTTCTCGTAGTTGTCATCAAGAACCTCGTTCCATGTCTACAGACGAGTCAGATTCTTTTGTTGCGGACGGGCATTCGAAGAAGAGGATAGTGAGAATAGTTAGACAAAAGGAAAAGAAGTTGGAAGCGAAGCAAATAAATGACACCCTTTCTGCGAGTGATATGGCATTGCATGTGAAGAAAAGGTTGGGAAATATGACACCAGATTGCAATGAATTTCTCTCTATTGACATGAAATCGACACCTTTGTCAAGTTCAATTTGTGATGCTGGTGAAGCTGCAGTAGCCACTGCTAAAGCCTCTAATGTCTCCAAAAAGTTTAGTGAGAATGGTGTGCAAGGCAGAAAGGTGTCTGTTGAAACATTGAAGGAGGAGTCATTGGAGTCTATATCTGGTCAGGATTTTAAAAAGATTGAAAAGCAGACAAATGTTCTAGAAGAAAAACTGGGAAATTCCCTAAAGGACAGTTCTGCTGACCCTAAGAATGACAGCAAGAGTAATACTTACACGATTTCCAAAAATGTTGAACGTGATGCAGACAAATGTAAGATTGACAAACGATATGAGACCCCTAAGAGGGTGAAGGTTGTATCTGAAGGGAGGAGCAAGTCAAAAGGCAATGAAAGTCCTGGGAAACCTGAGTCTGTTGCCAGAAAAGATAGCTTTGGTGGTGCTAATAGTGCAATGGTAAGTGATAAAGGGAGTGCTGACTTTGGCACGGCTAGTAGAAATAAAATGATCAAAACAAAGGGGCAGAAGGATAATAAGGTCAGAGATGGTAGCAAAGGGTCATTGAAAGAGAAAAACTCAGATCAGAAAGTCGATGATTTTCCTGGTAATAGTTCTGTTAAGACTTCCAAGTCTAACAATAATAATGAAAAACAGACTGCATTTTGCGCTAAAGTAAAGGAAAGACCAAGTGGCAATAAAGTGGTTAACCACTCGCTAGCTGGGCCACACAAAACAGATGATCTGGGTTCATTTCCCATGGCTGAAAATAATACTGCTCTGGAGATGATTCCAACAGCAGTAGCAGCACCTCAACTTATTGCAGAAGATTGGGTAGCTTGCGACAGATGCCAGAAATGGAGGCTTCTACCTACTGGCTTAAAGCCAGAGCAACTTCCAGAGAAATGGTTGTGTGTCATGCTTAATTGGCTGCCTGGGATGAATTCTTGTGACTTCAGTGAGGATGAGACAACAAAGGCATTGTATGCTTCATATCAAGTGCCGATTTCTGAGGGTCAAAATAACTTGCAAACGCATGCCTCTGAAACTGCATTTGGAGTGAGCTCTGCTGATGCATCACAGTTTGGTCTGAATCACAAAAAGTCCAATTCTAACGTGTTGCTTGACCAAGGAAAGAAGAAACCTGTTTTTAAGGAAAAGATAATGTCAGGAAAGCTCAATGCTCAAGTATCAGGAAAAAATAGAAACTTGAATCAACATTCTACAGATTCTAAACCAATGAAGATGAAACATCCCAGCAGGTCTAACAACACGATAGAAGAGAGACATGTGTCCGAAGAGAGAGAAAAGCAAACAAGTGAAGGTACCAGAAAGTATATTAAGTTGAAACGTAAGACAGATGCTGATCAATCTAGTTCTGGAACTCCTAAGAAATCAAAAACTGAACATGTTCCCTATGCTGATAAACAACCGAATCCTGGCACGGGCCTTGGGAAGGTGGTTCTAAATGCAAGAGGCAGTTTACCAACAAAAGCTAGCAGAAAGGATGTGAGGAAGTATGATGATTTTGGCTTACCCATTGATGATGATGATAGCTTACTAGTTCCTGAAAAGAAAGAGGGAGATCAGGCTGAAGTCACTTCTGGTGTTGGCTCGATGAATGTGAAGAATAGCAGTAAAAATGGCAGTTTAAGAAAGAGACAGAAATTCAATAACTGGCCAGACAATGAGACCGAGAAGCATAACAGCTCAAACTCTTTGCATGGTGATAAACAGTGTGGTGAACAGGGAAGCACAAGTAAACTTCGGAAGGAAAATCAGTATAAAATTTCGAATAAAGAGGAAAGTTTAGTTGCTGAAGGTGATGATAAATTGAGGAAAGGTAGGGTGAGGCGAGTTTCCTTACCAGGCAGTCGGGACCAAATGACTGTTGAGACAGAAGGAAGATATGTTGATAATGACTATCAGCCAACGAAGCGCAGAAAAAGTATTGCATCTCATCAAGCTTTGGATGGTATTGCTCCATTGGGCTCTGGACGACAACTAGCATTTGCTGCCACTTCAAGCTCTTCAAAGGTTTCAGGCTCTCATAAAGTTAGAACCAACTTTGACGACGTGAAAGGTTCTCCTGTGGAATCTGTTACTTCGTCACCTTTGAGGTCCTCTAACCTAGATAAACATGTTTTGACAGCAAAGCATATTTCAGTGAAGGATGATACTGTAAAAGTCAGCCACTCTTCAAGAAGAGGTGCGAATAACGGGGAGGGGAAGTTATCATTAAAATTGAAGGGGGACAAGATTTCAAATAATGCACATCCTGCACCCCACAAATTAACTTCAACAGAGTACCAAGTTAAGGAAGCTAAAGACAAAGTCAGGGTCCAAGCAAAAACTTCTGAAATTAAGAGTAATCGTTTGCTTGGCGTTCCCGTTGAAGAACATGACAATAGTGGCACACGTCATGAGGAGAAAGTGAGCAGGAACAACCGGGACGAATTGTCTGGGAAGAAACCCGACAAGGTGACGTCATTGCAAAGCATGGAAAAGAACAGAAGGTCTGGTTCTCAGGTTGGTACAGATAAGATGAAGGTTTTGACTTCAGAGAGTTGTTTTTCTAAAAATGGTGAAAGGCATGATTCACAAGTCGACATAGGTACCGAGACAAGTTATGATGCTAAATACCGTTCTCCTATGTCTAAATGTGAGATTGACAGTGTTAGTCAGAAGAGTGCTTTAAGACACGGGTCAACTGAAACTGGAAAGCAAACTGAGCTGAAACAAAAAGACTTTGAAAAATCTGTTATGAACATGGATACTCAACGTTGTACTGGTAGTACAAGAAAGGGTACGTCCCAGCCAAATGTGGCTAAGGATGCCGAGGAAGAAAACAAAGCTAATCACGTAGGCATGGAATCAAGAGATAGGAAATCCAAAGTTCTCTTATCTGCTGATGATGAAAAAAAAAGGGAAACATTAGCTGTACCACGGTATCAAAAGGGAGATATCTCTAATGAAGATCCAGCTTATGCCGGTAACAGTGATTTGACCAAGTTAGTGAGAAATTCTGCTGATTCTAGTGGCAATGTCTTAGTTAATTGTAGTTCTGGAAGTGTTGCACCTGGCCAACAACTCACTGTGTCAAGTCCTGTGAGAACAAGTGCTCAGCAAACTGCAGTTGACACCCTGGAAGAAGCCACAAAACAAAAAGAAAGGGCAGATCACTATAAGAACTCCGGATTTGATTTTGAAAGCAATGAGACCTACTTTGAAGCTGGTTTGAAGTTTCTGCATGGAGGATCTCTCTTAGAAAGTTGTCATAATGAGATTAGCAAGCACGGGGAGATGAGTCAAATGCAAATTTATGCCACGGCAGCCAAACTTTTCAAGTCATGTGCCCATGAATATGAAAGTCGTCAAGAAATGGCAGCAGCTGCATTGGCATATAAATGCATGGAGGTGGCATATATGAGAGTGGTTTACTGCAAACATTCTAGTACAAACCGAGATCGGTGTGAGTTGCAATCAACTCTTCAAGTGGTTTCTCAAGGTGAATCTCCTTCATCTTCAGCATCTGATGTTGATAACTTAAACAATCAAGTGGCAATGGATAAGGCTACTTTGCCCAAGGTTACTAATGCTCATGTTGCTGGTAACCATGTCATATCTGTTCGAACTCGTCCAAGTCTGCTCAGGCTTCTCGATTTTACTCAGGATATAAATTTTGCAATGGAGGCTGCTACAAAATCTCATAGCACTTTCTCCGCTGCCAATGCGACGATGGAAGAAACACGGAATAGGGACTGTATAACTTCTATTAAGAGGGTTATTGATTTCAGCTTCCAGGACGTAGGTGAGCTTGTACGCCTGGTCCGGAATGCAACAAAGGCAATAAGTGGTGCTGGTCTTGGTGGTGCTAGAGATTAA 4929 0.4169 MEDNNTELEEGEACYYKDDDDDNTDLDSLSYIDERIQHVLGHFQKDFEGGVSAENLGSKFGGYGSFLPTYERSHPKTPQGNQSSPQSPIVLHKEAVPDNRKVPSNMAPAARIGNASHSSNSFRDVRAASIDVSVKKDSGISSNDVAGRCTLKDDTPIKKGNSTDQRPLKFRLKMNSNFLAQKTAEIYSGLGLDDSPTSSMENSPVESEGTPPLPPPPPPPPVSKAKAEGSAIEIIKAMTSFAIPGGVLLSPLPESLLFSVKNKKDHGDVRYMSSRSCHQEPRSMSTDESDSFVADGHSKKRIVRIVRQKEKKLEAKQINDTLSASDMALHVKKRLGNMTPDCNEFLSIDMKSTPLSSSICDAGEAAVATAKASNVSKKFSENGVQGRKVSVETLKEESLESISGQDFKKIEKQTNVLEEKLGNSLKDSSADPKNDSKSNTYTISKNVERDADKCKIDKRYETPKRVKVVSEGRSKSKGNESPGKPESVARKDSFGGANSAMVSDKGSADFGTASRNKMIKTKGQKDNKVRDGSKGSLKEKNSDQKVDDFPGNSSVKTSKSNNNNEKQTAFCAKVKERPSGNKVVNHSLAGPHKTDDLGSFPMAENNTALEMIPTAVAAPQLIAEDWVACDRCQKWRLLPTGLKPEQLPEKWLCVMLNWLPGMNSCDFSEDETTKALYASYQVPISEGQNNLQTHASETAFGVSSADASQFGLNHKKSNSNVLLDQGKKKPVFKEKIMSGKLNAQVSGKNRNLNQHSTDSKPMKMKHPSRSNNTIEERHVSEEREKQTSEGTRKYIKLKRKTDADQSSSGTPKKSKTEHVPYADKQPNPGTGLGKVVLNARGSLPTKASRKDVRKYDDFGLPIDDDDSLLVPEKKEGDQAEVTSGVGSMNVKNSSKNGSLRKRQKFNNWPDNETEKHNSSNSLHGDKQCGEQGSTSKLRKENQYKISNKEESLVAEGDDKLRKGRVRRVSLPGSRDQMTVETEGRYVDNDYQPTKRRKSIASHQALDGIAPLGSGRQLAFAATSSSSKVSGSHKVRTNFDDVKGSPVESVTSSPLRSSNLDKHVLTAKHISVKDDTVKVSHSSRRGANNGEGKLSLKLKGDKISNNAHPAPHKLTSTEYQVKEAKDKVRVQAKTSEIKSNRLLGVPVEEHDNSGTRHEEKVSRNNRDELSGKKPDKVTSLQSMEKNRRSGSQVGTDKMKVLTSESCFSKNGERHDSQVDIGTETSYDAKYRSPMSKCEIDSVSQKSALRHGSTETGKQTELKQKDFEKSVMNMDTQRCTGSTRKGTSQPNVAKDAEEENKANHVGMESRDRKSKVLLSADDEKKRETLAVPRYQKGDISNEDPAYAGNSDLTKLVRNSADSSGNVLVNCSSGSVAPGQQLTVSSPVRTSAQQTAVDTLEEATKQKERADHYKNSGFDFESNETYFEAGLKFLHGGSLLESCHNEISKHGEMSQMQIYATAAKLFKSCAHEYESRQEMAAAALAYKCMEVAYMRVVYCKHSSTNRDRCELQSTLQVVSQGESPSSSASDVDNLNNQVAMDKATLPKVTNAHVAGNHVISVRTRPSLLRLLDFTQDINFAMEAATKSHSTFSAANATMEETRNRDCITSIKRVIDFSFQDVGELVRLVRNATKAISGAGLGGARD 1642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1149 1181 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1 20 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 67 87 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 547 565 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1289 1319 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 72 87 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 856 879 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 742 758 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 905 921 - -
Vifa1g09261 1642 PANTHER CW-TYPE ZINC FINGER 2 1633 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 519 546 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 192 206 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 856 942 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 922 940 - -
Vifa1g09261 1642 Gene3D - 621 675 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 759 806 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1075 1094 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 189 227 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 882 904 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 422 565 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1275 1319 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 208 224 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 1134 1193 - -
Vifa1g09261 1642 ProSiteProfiles Zinc finger CW-type profile. 620 673 IPR011124 GO:0008270
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 739 836 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 446 487 - -
Vifa1g09261 1642 MobiDBLite consensus disorder prediction 273 293 - -
Vifa1g09261 1642 Pfam CW-type Zinc Finger 626 671 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09261 Vifa-Chr1 1465874595 1465882053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09261 - - gmx:102667636 1868.97