Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09226 ATGATAACAACAGTGAAGAATGATTGTGATGACATTGAATCCATTGATCAAGAAAGTGGAGAAGAAAGTACTCATCTAGATCTATCAAATTCCTCCATCATCAACAACAAGACAATGCTGCACCATCTGCATGCAGATCAAAAGTCCACCATCAACAAAAGGTACATACCCCTTTTGGTAATCAACTATCTTTTCCTCTTTCTAGGCTCACTTTCTTCAAGTTTACTCTCTAAGTACTATTTCATCCACAAAGGTTCAAGTAGATGGGTTTCAACTTGGGTTCAATCTTCTGGTTTTCTTCTCTTAATTATCCCTATTTTTTCACCTTATTATCTCTTTCAATCAACAAAAAGAAAACCCTTTTCTGATTTCAACCCAAAGATGCTAACTTTATCAGTTTCTATTGGTGTTATGTTGGGAGTTAATAACTTTTTTTTCTCATGGGGAAATTCATATCTCCCAGTTTCGACTTCTGCTTTGTTGTTATCTTCAAACCTTGTTTTCAATCTTGTTCTCTCTGTCATCATTGTGAAGCAAAAAGTAACCTTTTCGAATCTCAACTGTGTTATGCTTCTTACATTAAGCTCAATCCTTCTAGCATTGGATTCTAGTCATGAAAAACCAAACGGGGTGAAGAAAAGAGAGTACTTTATAGGATTCTTTTGCACAATCGGTGCAGGGTTGTTGTTTGCTTTGTATTTACCAGTGATGGAGAAGGTTTACAGAGAGGTATATTGTTATGAAATGGTGATGGAAATGCAGGTTATAATGGAGATTGCAGCGACGGTTTTAGCGACGGCGGGAATGGCGTGGGATGGTGGATTTTCTGAGATGAAGAGAGAAAGTGAGCAAGTGTTTGATAAGGGGAGTAGGGTTTATTGGGTGACTGTTATAGGGAATGTGGTGACGTGGCAGTTTTGTTTCATGGGAACTGCTGGGATGGTGTTTTTGACATCTTCATTGACTGGTGGGATTTGTATGACAGCATTGTTGTCTATGAATGTGTTGGGTGGTGTTTTGGTTTTTAGAGACGAGTTTGGTGGAATTAAGGCTATTTCAACTGTTTTGTGCATGTGGGGATTTTGTTCTTATGTTTATGGAATGTATGTTAAGATGTTGGAAGAGAAAGGGAGAATGAGGAACCTGAATGACTCTTCTACTGAGATGATTTATATAGGGAATCACGATGATGTGAATGATTGA 1203 0.3782 MITTVKNDCDDIESIDQESGEESTHLDLSNSSIINNKTMLHHLHADQKSTINKRYIPLLVINYLFLFLGSLSSSLLSKYYFIHKGSSRWVSTWVQSSGFLLLIIPIFSPYYLFQSTKRKPFSDFNPKMLTLSVSIGVMLGVNNFFFSWGNSYLPVSTSALLLSSNLVFNLVLSVIIVKQKVTFSNLNCVMLLTLSSILLALDSSHEKPNGVKKREYFIGFFCTIGAGLLFALYLPVMEKVYREVYCYEMVMEMQVIMEIAATVLATAGMAWDGGFSEMKRESEQVFDKGSRVYWVTVIGNVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVFRDEFGGIKAISTVLCMWGFCSYVYGMYVKMLEEKGRMRNLNDSSTEMIYIGNHDDVND 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09226 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 124 205 - -
Vifa1g09226 400 MobiDBLite consensus disorder prediction 1 26 - -
Vifa1g09226 400 MobiDBLite consensus disorder prediction 9 23 - -
Vifa1g09226 400 PANTHER OS09G0467300 PROTEIN-RELATED 50 375 IPR030182 GO:0015211|GO:0016020
Vifa1g09226 400 Pfam Purine nucleobase transmembrane transport 58 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09226 Vifa-Chr1 1460461297 1460462499 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09226 42 367 Organic Solute Cotransporters AT1G30840 63.063 1.46e-143 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09226 - - mtr:25488190 640.573