Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09223 ATGAACCCTACCAATGAAAACGACACAATTGTCATAGAAGCCATTGATCTTCAAGAAGAAACACAACAACCTCAAAACCAACCATCACCCATGAACAACAACAACAATAATCACATGCATGCAGATGAAAAAGCATTCACAAACAAAAGGTACATGCCCCTTTTGATAATCAACTACCTTTTACTCTTTGTTGGTTCCATCTCATCAAGTTTACTCTCAAAATACTATTTCATCCACAAAGGTTCTAGCAAATGGGTCTCAACTTGGGTTCAATGTGCTGGTTTCCCTCTCTTAATCATCCCAATTTTTCTACCTTATCTTCTCAATTCCACCAAAAGAACACCCTTTACTGATCTCACTTCCAAAATGCTAACTTTATCGATTTTCGTCGGTATCATGTTAGGGTTGAACAATCTTTTAATCTCATGGGGTGTTGCTTATCTCCCAGTTTCAACTTCAGCACTTTTGTTATCTTCACAGCTTGTTTTCAATCTCATTCTCTCGGCTATTATAGTGAAACAAAAAATCACTTTTTCAAATCTCAATTGTGTTATTCTCTTAACCCTAAGTTCAATCATTCTTGCACTGAATTCCAGTAGCGAAAAACCAGAAGGGCTAACGAAAAAAGAATACTTTATTGGATTCTTTTGCACCCTAGGTGCAGGGTTGTTATTTGCACTTTATTTACCGGTGATGGAGAAGGTTTACAAAAAGGTTTATAGTTACGAAATGGTGATGGAAATGCAGCTTATAATGGAGATTGCAGCGACGGTTTTAGCGACGGTGGGAATGGCGTTCGACGGTGGTTTTTCTGAGATGAAGAGAGAAAGTGAAGAAGAGTTTGATAAGGGCAGTAGAGTTTATTGGGCGACGGTAATGGCGAATGTGGTGACGTGGCAGTTTTGTTTCATGGGAACTGCTGGGATGGTGTTTTTGACATCTTCATTAACTGGTGGGATTTGTATGACTGCATTGTTGTCTATGAATGTGTTGGGTGGTGTTTTGGTTTATAAAGATTCATTTGGTGGTTTTAAAGCTGTTTCAACCGTTTTGTGTTTGTGGGGATTTTGTTCTTATGTTTATGGAATGTATGTTAAGATGTTGGAAGAGAAAGGGAGAACGATGAAGGAGAAGGAGAAGGAGAAGGACGTTTCATCGATGGAGTTGTTTAGTATGAGGACTAATGGAGGTGCAACTGGTTGA 1203 0.3874 MNPTNENDTIVIEAIDLQEETQQPQNQPSPMNNNNNNHMHADEKAFTNKRYMPLLIINYLLLFVGSISSSLLSKYYFIHKGSSKWVSTWVQCAGFPLLIIPIFLPYLLNSTKRTPFTDLTSKMLTLSIFVGIMLGLNNLLISWGVAYLPVSTSALLLSSQLVFNLILSAIIVKQKITFSNLNCVILLTLSSIILALNSSSEKPEGLTKKEYFIGFFCTLGAGLLFALYLPVMEKVYKKVYSYEMVMEMQLIMEIAATVLATVGMAFDGGFSEMKRESEEEFDKGSRVYWATVMANVVTWQFCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYKDSFGGFKAVSTVLCLWGFCSYVYGMYVKMLEEKGRTMKEKEKEKDVSSMELFSMRTNGGATG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09223 400 MobiDBLite consensus disorder prediction 19 38 - -
Vifa1g09223 400 Pfam Purine nucleobase transmembrane transport 54 367 - -
Vifa1g09223 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 111 199 - -
Vifa1g09223 400 PANTHER OS09G0467300 PROTEIN-RELATED 46 376 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09223 Vifa-Chr1 1459903498 1459904700 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09223 35 362 Organic Solute Cotransporters AT1G30840 63.095 1.49e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09223 - - mtr:25488190 586.645