Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09017 ATGTTGCGTGGTTCACTCTCAACACCAACAACTCAAACTCTTAAAGCAGCAGCAACAACAAGAACAACAACAATTACAATGCTTTGGTCATCTCGTAGATTATCATCAACACATTTTTGTCTTTTTAAGAATCTTATAGCAGGTAATACAAGATTTTCCTCAAATGAGAGTTGTTTTCTCAGAGGTCGCCAAATTAATATCAAACAAGTTTTTGGGCTTATCTCTCGTCGACCTCCAAGAAATAAAGCAGGATTTGTTGTTTCTCCAAGATGTGTCCTGCCACTGACAGAAGAGAATGTGGAAAGGGTTTTGGATGAGGTGAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCCTTACATGAGATAGATGGTCTTGTTGTTATCCTCAAACTACAAGGAGCATGTGGATCATGTCCTAGCTCAACAATGACATTAAAGATGGGGATTGAAACTCGCCTTCGCGATAAGATTCCAGAAATCTTAGAAGTTGAGCAAATACTTGATACTGAGACCGGTCTTGAGTTAACCGAAGAAAATGTTGAAAGTATTCTTTCGGAAATTAGACCATATCTTATTGGCACTGGAGGAGGAACATTAGAGCTTGTTGAGATCAGTGATTATACTGTTAAAGTTCGGTTAAGTGGACCGGCAGCAGGAGTCATGACCGTTCGCGTTGCCTTGACGCAGAAGCTGAGAGATAAGATACCTTCTATTGCAGCTGTGCAGCTAATAGAATGA 741 0.4103 MLRGSLSTPTTQTLKAAATTRTTTITMLWSSRRLSSTHFCLFKNLIAGNTRFSSNESCFLRGRQINIKQVFGLISRRPPRNKAGFVVSPRCVLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEENVESILSEIRPYLIGTGGGTLELVEISDYTVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09017 246 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 95 244 - -
Vifa1g09017 246 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 175 245 IPR034904 -
Vifa1g09017 246 Pfam NifU-like domain 100 165 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vifa1g09017 246 Pfam NifU-like domain 181 243 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vifa1g09017 246 Gene3D - 175 246 IPR034904 -
Vifa1g09017 246 Gene3D - 92 174 IPR034904 -
Vifa1g09017 246 FunFam NifU-like protein 3, chloroplastic 92 174 - -
Vifa1g09017 246 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 97 171 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09017 Vifa-Chr1 1431381765 1431382962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09017 - - gmx:100806364 336.265