Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09013 ATGAATTACGAAAAGGAGAAAACCGTTTTTTCATCTTCTTCTTCTTCTTCCTTTACCTTATCCAAAGGGATCAATGGTCTCGATAAGGTTCTTCTTCGCGAGTCTCGTGGTTCATCCGCAGAGGTTTACCTGTACGGTGGTCACGTGACTTCTTGGAAGAATGAACATGCAGAGGAATTGCTTTTTCTCAGTAGTAAGGCTATCTTTAAGCCACCTAAGGCTATCCGCGGAGGGATTCCAATATGCTTTCCACAATTTGCAAACCATGGACCCCTGGAATCACATGGATTTGCTAGAAATCGGTTTTGGACCATTGAAGATGATCCTCCTCCTTTTCCAACAAATAATTTGAGCAAAGCCTTTGTTGATTTGATTCTTAAACCCTCTGAAGAAGACTTGAAAATCTGGAACCACAGTTTCGAGTACCGTTTGAGGGTAGCTTTGGGACCCGCAGGAGATTTGATGTTGACTTCTCGGATTCGGAACACAAACATTGATGGAAAGCCATTTTCGTTCACCTTTGCTTATCATACATATCTATCAGTATCAGACATAAGTGAAGTTCGGGTTGAGGGATTAGAGACCCTGGATTATCTTGACAACTTGCAGAACAAGGAGCGTTTTACTGAACAGGGGGACGCTTTGACGTTTGAATCAGAAGTTGACAAGATATATCTTAGTACTCCAACAAAGATTGCAATTATTGATCACGAGAAAAAGAGGACATTTGTTTTGCGTAAAGATGGCATTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGGCTGATTTCGGCGATGATGAGTACAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGTCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGACTAGAGCTTTCAGCTGTTCCATCTAGTTACTGTAGTGGGCAGCTTGATCCCCAGAAAGTTCTTCAGGGAAGCTGA 975 0.4226 MNYEKEKTVFSSSSSSSFTLSKGINGLDKVLLRESRGSSAEVYLYGGHVTSWKNEHAEELLFLSSKAIFKPPKAIRGGIPICFPQFANHGPLESHGFARNRFWTIEDDPPPFPTNNLSKAFVDLILKPSEEDLKIWNHSFEYRLRVALGPAGDLMLTSRIRNTNIDGKPFSFTFAYHTYLSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVLRKDGIPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKSITLKPGEEWKGRLELSAVPSSYCSGQLDPQKVLQGS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09013 324 Pfam Aldose 1-epimerase 29 303 IPR008183 GO:0005975|GO:0016853
Vifa1g09013 324 CDD D-hex-6-P-epi_like 34 304 IPR025532 -
Vifa1g09013 324 FunFam Glucose-6-phosphate 1-epimerase 25 310 - -
Vifa1g09013 324 SUPERFAMILY Galactose mutarotase-like 24 303 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa1g09013 324 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 22 309 - -
Vifa1g09013 324 Gene3D - 25 310 IPR014718 GO:0030246
Vifa1g09013 324 PIRSF PHexose_mutarotase 4 310 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09013 Vifa-Chr1 1430044648 1430050614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09013 K01792 - gmx:100809080 578.17