Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08937 ATGGAACACTCTGATAAAAAATCCACGAAGAAAACAAAAAACAAGAAGAAAGTGGATACAGAACCATTGCCTGAACCGGTTCATGATCCGGTTCAGGTTAAGGTTGAAGTTGTCCGACCAGATCCAGAGAAAATGCCGCCGTTTGTTGGTTACTTTCCGTCTGGATTTGATGCGGTTAAGCAATCTTCCGGTTCCGCCGGTATCCAAGTTTATCGAAACCAGTTTATGAGTAAGAGAACTGAGCTTGTTGTTAGCCCTGCTGGTTCCTCGGTTGAATTCGTCGGAACGAGTTACGCCGGCGAGGCGACGGGACAGCGAGGGATGTATGCACTTGGTGTTTTTGATAAGGAAGCTCAGACACTTAAGGTTGTGCGAATTGGTGCTAATAAGATATTTAGATTGGAACCAAGAGTTAAAGGTTTGGAATATAAGGAGCCGCTTCCGAGTACGATTCCGGTGGAAGAAATGAGTCAGGATCAGTGGATGGCTAAAAGGAGATTGACTGATGCTACTTTTGGAACAAAGCGACATAATGAAATAAATCATAAGTTTGCTGAAATAAGAAGAGATGAAGAACCTGATGCTAAAAAGAACCTGGATGAGAAAATGAAAAATGTTGAAGTAAAAGAAATCGCTCTTGCAAACACAGAAGCTCACGTCGCTCGCCATATACCACCATATAATACTTCTGCAACGACACCTCAGGAGGCTTATGTATTGGATAAAATCATCCTTTCACTAGAATGGAATCACCTTCAAGACATTTATTATCTATTGCCAAAGGAAGAAGAAGCAGACTTTAGTGGTTACCCAACTTTTATTCGCAACAGGATAGACAAAGTAAAGAAGATTGAGGACGAGTCTGAAAAGAAAAAGCTTTGTTGCATACTCTCATTCATCAACTATCTTGTCAAGTTCAAAGATCAGCACCACATGGATGGTGTTTCCTCTTCAAAGGATTATAAAATTCCTTACATTCTGAAAAATAGATTTTCAACCTTGTTTGAAGTTTCCGAAAAAAGAAGGCTGCCACCTGAAAAGATTAGTCTTCTTGTTTCTTACGTTTTGGTGCTCACGCTTTTCACCGATGAATTCCACACTGACTACACAGATATATCAAAGGATCTGAGGATGACTATCGCTCCTGTGAGACAACTGTATGAGCATCTGGGTTGCAAATTTTTAAAGGAGAAGGGGATTTTCTATGCCACACTTCTTATGCCTCTTACATTTCCTAGTATAAGAAATTTTAAGAGGAAGAAAAGAAATTGA 1272 0.4009 MEHSDKKSTKKTKNKKKVDTEPLPEPVHDPVQVKVEVVRPDPEKMPPFVGYFPSGFDAVKQSSGSAGIQVYRNQFMSKRTELVVSPAGSSVEFVGTSYAGEATGQRGMYALGVFDKEAQTLKVVRIGANKIFRLEPRVKGLEYKEPLPSTIPVEEMSQDQWMAKRRLTDATFGTKRHNEINHKFAEIRRDEEPDAKKNLDEKMKNVEVKEIALANTEAHVARHIPPYNTSATTPQEAYVLDKIILSLEWNHLQDIYYLLPKEEEADFSGYPTFIRNRIDKVKKIEDESEKKKLCCILSFINYLVKFKDQHHMDGVSSSKDYKIPYILKNRFSTLFEVSEKRRLPPEKISLLVSYVLVLTLFTDEFHTDYTDISKDLRMTIAPVRQLYEHLGCKFLKEKGIFYATLLMPLTFPSIRNFKRKKRN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08937 423 Pfam A49-like RNA polymerase I associated factor 69 412 IPR009668 GO:0003677|GO:0006351
Vifa1g08937 423 MobiDBLite consensus disorder prediction 1 30 - -
Vifa1g08937 423 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 32 422 IPR009668 GO:0003677|GO:0006351
Vifa1g08937 423 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08937 K03005 - gmx:100812427 472.241