Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08913 ATGGATTCCGATAACAAAAAAACACAAAAAAACTGGAAAAACTCGCTACTCTACCTCACCTTCATTATCACAATCGTTCACCTCACACGTCAAACCAATTTCTCACGTAAACTAACAATCGACACCAAAACGGTGCGTATCAAGAAAACCTCCGATCTCCCTCTCCGGTTCCGTTCCGACGGTACCTTCAAAATCCTCCAAGTTGCTGATATGCATTATGGAAATGGAATTTTAACAAGGTGCAAGGACGTGTTGGCTTCTGAATTCGAGTTTTGTTCTGATCTTAATACTACTAGGTTTTTGAAGCGGATTATTCATGCTGAGAGTCCTGATTTTATTGCATTTACTGGAGATAATATATTTGAACCAAGCAGTTCTGATGCTGCCGAATCTCTGTTTCAAGCCTTCGGTCCTGCCATGGAGTCAAGACTTCCTTGGGCTGCAATTTTGGGAAACCATGACCAAGAATCAAATTTGAATCGTGAAGAGTTAATGTCCTTAATCTCCCTTATGGACTATTCAGTTTCCCAGGTCAATCCGTCAGATGCTAAAATTGATGGTTTTGGAAATTATAACCTAAGAGTATATGGTGCCCTAGGTTCCATGCTGGCAAATAGTAGTGTTTTGAATCTTTACTTTCTTGATAGTGGCGAGAGGATAACATATCAGGGACTTCGAACTTATGATTGGATCAAGGACTCTCAACTTCATTGGCTGCGTCATGTGTCTCATGAACCCGAGGGACAAGAGCAGGATCCTCCTCAATCTAATGATCATGATACTACTCCAATTTCACCGCCAGCACTTGCATTTTTCCATATTCCGATCCCAGAAGTTCGGAACCTGTTTTACGAAAAGATTGTTGGCCAATTTCAAGAGGGCGTAGCTTGTTCACGAGTGAACTCACCGGTCTTGCCAACGCTTGTCTCGATGGGAGATGTGAAGGCTGTATTCATAGGCCACGACCATAAAAATGACTTTTGTGGAAAATTGGATGGCATATGGTTTTGTTACGGTGGCGGCTTTGGCTATCATGCCTATGGAAAAACGGGGTGGCCAAGAAGAGCAAGGATTATACTTGCTGAACTTGAGAAGGGAAAAAATTCTTGGACTCAAGTGCAGAGAATTACAACATGGAAACGACTTGATGATGAGAAGCTGAGCAAGATTGATGAACAAATCCTATGGGATCGATTGTTTTCTGGATGA 1209 0.4202 MDSDNKKTQKNWKNSLLYLTFIITIVHLTRQTNFSRKLTIDTKTVRIKKTSDLPLRFRSDGTFKILQVADMHYGNGILTRCKDVLASEFEFCSDLNTTRFLKRIIHAESPDFIAFTGDNIFEPSSSDAAESLFQAFGPAMESRLPWAAILGNHDQESNLNREELMSLISLMDYSVSQVNPSDAKIDGFGNYNLRVYGALGSMLANSSVLNLYFLDSGERITYQGLRTYDWIKDSQLHWLRHVSHEPEGQEQDPPQSNDHDTTPISPPALAFFHIPIPEVRNLFYEKIVGQFQEGVACSRVNSPVLPTLVSMGDVKAVFIGHDHKNDFCGKLDGIWFCYGGGFGYHAYGKTGWPRRARIILAELEKGKNSWTQVQRITTWKRLDDEKLSKIDEQILWDRLFSG 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08913 402 Gene3D - 61 379 IPR029052 -
Vifa1g08913 402 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 21 397 - -
Vifa1g08913 402 CDD MPP_Dcr2 61 348 - -
Vifa1g08913 402 Pfam Calcineurin-like phosphoesterase 63 324 IPR004843 GO:0016787
Vifa1g08913 402 PIRSF Ptase_At2g46880 7 396 IPR011230 -
Vifa1g08913 402 FunFam Probable inactive purple acid phosphatase 29 62 374 - -
Vifa1g08913 402 SUPERFAMILY Metallo-dependent phosphatases 60 388 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08913 Vifa-Chr1 1412103788 1412109386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08913 - - mtr:11444902 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08913 1 1412103788 1412109386 Vifa1g08913 1 1412103788 1412109386 ECH