Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08861 ATGGCTGCATCTGCAAGAATCAACGTAACAATGATGATGGTGATGATAGCTCTAGCAATCTCTCTTTATTGGGATTCTGCTTCAGCTTCATCTCTGGGTGAGTTTGTTGACAAGACCATTAATTCCCACAAGATCGTCATCTTTTCCAAGACCTATTGTCCGTACTGTAGAAAAGCAAAAGCTGTTTTCAAAGAATTGAACCAAGTTCCGTTTGTTGTGGAGCTTGATGAGAGAGATGATGGTTCAAAGATTCAGGATGTTTTGACTAACATTGTTGGTAAGCGTACTGTGCCACAAGTTTTCATCAACGGGAAACACCTTGGCGGATCAGATGATACTGTCGAAGCATATGAGAGCGGGCTTTTGGCTAAACTTCTAGGAATTGAGACCGACGATCATGATGATCTTTGA 411 0.4161 MAASARINVTMMMVMIALAISLYWDSASASSLGEFVDKTINSHKIVIFSKTYCPYCRKAKAVFKELNQVPFVVELDERDDGSKIQDVLTNIVGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIETDDHDDL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08861 136 ProSitePatterns Glutaredoxin active site. 47 62 IPR011767 -
Vifa1g08861 136 SUPERFAMILY Thioredoxin-like 34 126 IPR036249 -
Vifa1g08861 136 Pfam Glutaredoxin 45 106 IPR002109 -
Vifa1g08861 136 PRINTS Glutaredoxin signature 104 117 IPR014025 -
Vifa1g08861 136 PRINTS Glutaredoxin signature 45 63 IPR014025 -
Vifa1g08861 136 PRINTS Glutaredoxin signature 90 103 IPR014025 -
Vifa1g08861 136 Gene3D Glutaredoxin 23 127 - -
Vifa1g08861 136 NCBIfam glutaredoxin 45 125 IPR011899 -
Vifa1g08861 136 ProSiteProfiles Glutaredoxin domain profile. 33 133 - -
Vifa1g08861 136 PANTHER GLUTAREDOXIN 2 19 127 - -
Vifa1g08861 136 CDD GRX_GRXh_1_2_like 44 125 - -
Vifa1g08861 136 FunFam Glutaredoxin 2 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08861 Vifa-Chr1 1403356037 1403358045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08861 34 126 Miscellaneous Gene Families AT4G15700 33.333 8.96e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08861 K03676 - gmx:100777703 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08861 1 1403356037 1403358045 Vifa1g08861 1 1403356037 1403358045 ECH