Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08832 ATGGTGATAAAAAAACCAAGGATTGTGATAATTGGAGCCGGAATGGCAGGTCTAACCGCCGCAAACAAGCTCTACACTTCAACGGCTTCAAAGGACTTATTCGAACTCTATATAGTCGAAGGAGGAACAAGAATAGGTGGAAGAATCAACACTTCGGAGTTTGGTGGTGACAGAATCGAGATGGGAGCTACATGGATCCATGGAATTGGTAATAGTCCAATTCACAAAATAGCTCAAGAAACAAGTTCGCTTCATTCTGAACAACCTTGGGAGTGCATGGACGGAAACAACAACGATGAATCGATTATTACAGTTGCTGAAGGCGGTTTTCATCTTCAATCTTCCATTGTTGAGCCTGTTTCAAAGCTTTTCAAGAGCCTCATGGAGTATTCACAGGGGAAGTTAACGAAAGAAACTGCCAAAGGTGAGGTTTTGAGTTACTATAACATGGCTGCTAAAGCTTCTTCTTTGAGCTTTGGCTCGAACTCGAAGAAGAATCTTAGTATTGGTTATTTCTTAAAACAAGGTCTTGAAGCTTATTTTGAGTCGGCGAAAGAAGGAGATGAAGTTAATGGAAGTAGTGATTGGAGCAAGAAATGGCTTGAAGAAGCGATTTTCGCAATGTATGAGAATACTGAAAGGACTTATACATCAGCTGGTGATTTGGAGTGTTTGGATTATGAATCTGAAAGTGAGTATAGAATGTTTCCAGGTGAAGAAATCACAATTGCTAGAGGCTATTTGAGTATAATTGATTCTATAGCTTCTGTTTTACCACCTGGTTTGGTTCAATTAGGTAGAAAAGTTCGAAAAATCGAATGGCAGCCACAGAAATTGTGTGCAGAACATGATTATGATTATGAGAGGAATAATTTTTTTAGGCCGGTTAAGATACATTTCTGTGATGGATCTGTTATGTATGCAGATCATGTCATTGTTACTGTTTCACTCGGAGTTTTAAAAGCTTCGATTTCTCATGATGATGATGATGATGTTGATGATGTTAAAGGTATGTTATTCTGTCCTAAGCTTCCGAATTCAAAAGTCGAAGCCATTTCGCGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTGCTTCTAAAGAAACCAAAACAACAAAACATGAAATTTCCTCAAAAGGATCCTTTCCGTATCTTCAAATGGTGTTTCATTCGCCTCAAAACGAAACACGGGACAAGAAAATACCATGGTGGATGAGGAAAACCTCAACACTTTTCCCCATTTACAACGATTCAAGTGTTCTTTTATCTTGGTTTGCTGGCGAAGAAGCATTGGCACTCGAATCACTCAAAGATGAAGAGATTATGAGAGGTGTTGCATCAACCGTTTCAAACTTTGTACCACCTCATTCGAAATCAATAAGCAAAGTTTTGACGAGTAAATGGGGAACAGATCCTTTGTTTTTAGGATCATATAGCTATGTCGCGGTTGGATCCAGTGGTGAAGATTTAGATACAATGGCTGAACCTTTGCCAATGAAGATGAAAGATGATAACAATAGTTTTTCATATGATCCACTTCAAATTTTGTTTGCAGGAGAAGCAACTCATAGAACTCATTATTCAACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCTAATAGGCTTCTTCAACATTATCATTGTGCTGGGATTTTGAACAACTAG 1683 0.3856 MVIKKPRIVIIGAGMAGLTAANKLYTSTASKDLFELYIVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGNSPIHKIAQETSSLHSEQPWECMDGNNNDESIITVAEGGFHLQSSIVEPVSKLFKSLMEYSQGKLTKETAKGEVLSYYNMAAKASSLSFGSNSKKNLSIGYFLKQGLEAYFESAKEGDEVNGSSDWSKKWLEEAIFAMYENTERTYTSAGDLECLDYESESEYRMFPGEEITIARGYLSIIDSIASVLPPGLVQLGRKVRKIEWQPQKLCAEHDYDYERNNFFRPVKIHFCDGSVMYADHVIVTVSLGVLKASISHDDDDDVDDVKGMLFCPKLPNSKVEAISRLGFGVVNKLFMQLSASKETKTTKHEISSKGSFPYLQMVFHSPQNETRDKKIPWWMRKTSTLFPIYNDSSVLLSWFAGEEALALESLKDEEIMRGVASTVSNFVPPHSKSISKVLTSKWGTDPLFLGSYSYVAVGSSGEDLDTMAEPLPMKMKDDNNSFSYDPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCAGILNN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08832 560 PANTHER FLAVIN MONOAMINE OXIDASE 6 554 - -
Vifa1g08832 560 Gene3D - 8 547 IPR036188 -
Vifa1g08832 560 SUPERFAMILY FAD/NAD(P)-binding domain 3 552 IPR036188 -
Vifa1g08832 560 FunFam Putative polyamine oxidase 5 isoform A 491 547 - -
Vifa1g08832 560 Gene3D - 94 490 - -
Vifa1g08832 560 Pfam Flavin containing amine oxidoreductase 15 549 IPR002937 GO:0016491
Vifa1g08832 560 SUPERFAMILY FAD-linked reductases, C-terminal domain 356 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08832 Vifa-Chr1 1397256947 1397258629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08832 K12259 - gmx:100778778 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08832 1 1397256947 1397258629 Vifa1g08832 1 1397256947 1397258629 ECH