Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08828 ATGAGCAACATGATATTCTTCTTAGTGATGTTGTTTTCAACTACTGTTACAAGCCATAGTGTTGATGGCAATGATATTACTTTGAAAGAAGAATTTGAGTTGGAGAGACATCTAAAGCTTATTAATAAGCCTCCTATCAGAAGTATTGAGACAGAGTTTGGATACATAGTTGATTGTGTTGATATTAAAAAACAACCTGCATTTGATCATCCGTTATTAAAGAATCATAAATTACAGATGCGACCAAGTTTTTATTCAAAAAATGAGAAATTTTTTTTGAATATTTCATCAACTAAAACTAGATTTAGACCTGACATAGTCGATTGTCCTAAAGGATCTGTTCCAATACGAAGAACAACAAAAGAAGATCTCATTCGTGCTAAAATTTTATTGAATAATTCTACTTTGGTTAAACGCGAAGCTCATACAGCGGAAGTATATGTTCGTGGAGGACATTATTATGGCGTAAGGGGAACTACTAGTGTTTATAAACCAGAGTGTAGTATTAATCAAGCTAGCATGTCTAATGCGTATGTCCGCAATGGAGAGGGAGGCGCTGTTAATGAAATTAGTGTTGGATGGCATGTATTTCCCCATTTATATGGTGATGATCGCTCATATATTTATGCAACATGGACGTCAGATGATTATGTTAAGACAGGATGCTACAATTTACAATGTCAAGGTTTTGTTCAAATCCACGGTAAATATTACCTTGGTGTACCTATAAGATCAGTGTCTGTTTACGGTGGAGAAATATATGAGATGCCAGTTGCTATTTATCAAGACGCAAAATCTAAAAATTGGTGGCTATCCATTTTGAATGAAACAATTGGATATTATCCACAAGAATTATTCAACAACTTAAAAGAAGCTGCTCAAGTGGGATGGGGTGGAGCGACAATAGCTATGGGTGATCCTAGCCCTAAAATGGGATCTGGATACTTTCCTGATAGGAACTTTGCACATGCATGTTATTTTCTAAATATTGGATATAAAACTGCAACTAATTCTCAATATTATGGACCTAGTTATTATGCAGCAAGAGTTTTCAATGATGTTCCTAAGTGCTTTGGAGTTGAGTACTATGGTAGACAACCAAACCCGTATGGATATTGTCTTCAATTTGGAGGACCGGGTGGCAAATGTGGCTATTAA 1158 0.3541 MSNMIFFLVMLFSTTVTSHSVDGNDITLKEEFELERHLKLINKPPIRSIETEFGYIVDCVDIKKQPAFDHPLLKNHKLQMRPSFYSKNEKFFLNISSTKTRFRPDIVDCPKGSVPIRRTTKEDLIRAKILLNNSTLVKREAHTAEVYVRGGHYYGVRGTTSVYKPECSINQASMSNAYVRNGEGGAVNEISVGWHVFPHLYGDDRSYIYATWTSDDYVKTGCYNLQCQGFVQIHGKYYLGVPIRSVSVYGGEIYEMPVAIYQDAKSKNWWLSILNETIGYYPQELFNNLKEAAQVGWGGATIAMGDPSPKMGSGYFPDRNFAHACYFLNIGYKTATNSQYYGPSYYAARVFNDVPKCFGVEYYGRQPNPYGYCLQFGGPGGKCGY 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08828 385 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 34 382 - -
Vifa1g08828 385 Pfam Neprosin activation peptide 48 154 IPR025521 -
Vifa1g08828 385 Gene3D - 168 284 - -
Vifa1g08828 385 Pfam Neprosin 170 379 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08828 Vifa-Chr1 1395291045 1395292709 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08828 - - psat:127115761 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08828 1 1395291045 1395292709 Vifa1g08828 1 1395291045 1395292709 ECH
Vifa1g08828 1 1395291045 1395292709 Vifa4g02001 4 584618621 584621197 PCT