Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08801 ATGGCAGAAAAACCCCAACCGGTTCGGGTATTATACTGCGAGGTTTGCAGTTTACCCCCCGAGTATTGCGAATTCGGATCCGATTTCGATAAATGCAAACCCTGGTTGATCCAAAACGTACCCGATTTATACCCTAATCTTCTTAACGAGGCGAATGAGAAGGAGGCTGATAAAGTTGCTGATAAGTTACAAGCTACTGGTATTTCTTCTGCTTCTAGTGCTGGTGCTGCTTCTTCAGGGAAGCCAGAAGAGGTCAAACGGCTTCCAGGTGGGAAGATAAAGAAGAAGGACAAGCAAGAGGTTATAATTGAGAAGGTCGTGCGTAACAAACGAAAATCTATCACCACCGTGAAAGGCTTGGAACTTTTTGGTGTCAAGCTCAGTGATGCTTCAAAGAAACTCGGGAAAAAGTTTGCTACAGGAGCTTCTGTCGTCAAGGGCCCAACTGAGAAAGAACAAATTGATGTTCAAGGGGATATATCTTACGACATTGTGGAGTTCATTACAGATACATGGCCTGACGTTCCGGAAAGAGCAATTTTCTTTATAGAAGATGGGAAGAAGGTTCCAGCTGCTTGA 579 0.4421 MAEKPQPVRVLYCEVCSLPPEYCEFGSDFDKCKPWLIQNVPDLYPNLLNEANEKEADKVADKLQATGISSASSAGAASSGKPEEVKRLPGGKIKKKDKQEVIIEKVVRNKRKSITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPERAIFFIEDGKKVPAA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08801 192 SUPERFAMILY eIF1-like 19 183 IPR036877 GO:0003743|GO:0006413
Vifa1g08801 192 CDD DENR_C 99 184 IPR046447 -
Vifa1g08801 192 Gene3D - 50 177 - -
Vifa1g08801 192 MobiDBLite consensus disorder prediction 70 92 - -
Vifa1g08801 192 FunFam Translation machinery-associated protein 22 68 178 - -
Vifa1g08801 192 ProSiteProfiles Translation initiation factor SUI1 family profile. 101 172 IPR001950 GO:0003743|GO:0006413
Vifa1g08801 192 PANTHER DENSITY-REGULATED PROTEIN HOMOLOG 2 188 - -
Vifa1g08801 192 Pfam Translation initiation factor SUI1 98 171 IPR001950 GO:0003743|GO:0006413
Vifa1g08801 192 NCBIfam density-regulated protein DRP1 7 180 IPR005873 GO:0003743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08801 K24272 - gmx:100306708 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08801 1 1390219956 1390223974 Vifa1g08801 1 1390219956 1390223974 ECH