Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08665 ATGGTAGCCATGGCAACCCCCAAGAGAATCAAAACCTACGAAGACTTCGCTAAAGTTCATGCAATTCTACTCGCTGCCTCAGGCTTGCCGGAGCCACTTCACCGCCGTCTCTTCCAAAAACTCTCCACCGAGACATTTGACGGCGGCGAACACTTCCAGATCGAGCCTTGCGAAGAGAATCGCCAGAGACGCCTCGTTTTAACTTCAGATTCTATGGCCAAAGACTCCAACGTCTTCCTCATTGATCACGCTTGGACTTTCAGACTCCCCGACGCTTACAAACAGTTGCGTGAAGTTCCGGGATTAGCAGAGAGGATGAGTTCTTTGATGTGTGTGGATACTGACAGAAATTTAGATGGTGAAACTGAGGTGGAGGGTGTTGGTGATGAAGCTTCGAGAGAGAAGGCTGATGTCGTGGAAGTTGTTGAAAGTGAGGTTCGAGAGGCGAAAGAGAAAGGCGATGGTACATTGAGATGGTTGGAGCTTGACAGTCTTGACATTGATGATGATACGCTTCTCTCACTGGACTTGCCTGCCAGATTTCCGGATTTAGTTGCGCTTAGCCTATATGGAAACAAGCTTACAAGAGCTGACCTGATTGTTAAAGAAGTTATCAAATTTAAACATCTCAAAGGACTCTGGCTGAATGATAATCCGGTTCTTAAAAATCGTGATGGTGAGTTTGCAGATATTATTCTTAAGGAATTACCAGAACTGGAGATTTATAATTCAACTTTCACAAGCAACTTTGGGGAATGGGCTTTGGGCTTTTGTGCAGAGATATATGGAAAAGATAGCCCAACAAATGCTGATCAAGCTGACAGTCCACTGCTGAGTGTATCTAATCTTGACCTTTCAGATAGAAACATTCACAATTTGACCAACAAGGATTTTTCACCCATTTATTTGCCATCCCTTTCGTACTTGAACATTCATGGAAATCCATTGGAGCAAAACTCAGTTGCCAATTTGTTAGGTTTGCTGAGGGGATTCCCTTGCTTACATTCATTGGAGGTTGATATTCCTGGTCCTCTTGGAGGAAGTGCCATTGAAATTCTAGAATCTCTTCCAAACATTTCTGAACTAAATGGTATTAGTACATCCAAAATATTGGGAACTGGAAAGCATGTTATTGATTCAGTGCTTCTTCCTCGCCTCCCTGAATGGACCCATGACGAGCCTATTCATGACCGTATTATAAGTGCAATGTGGCAATATCTAATGACATATAGACTTGCTGATGAAGAAAAGTTAGATGAAACCTCTGTATGGTATGTAATGGATGAATTTGGTTCTGCTTTGCGGCACAGTGATGAGCCCAATTTTAGAGTGGCACCCTTTCTTTTTATGCCGGAGGGCAATCTAGCATCAGCCGTGAGCTATTCTATTCTATGGCCGACACAGAATGTTTGGAAAGGGAATGAATGCACTCGTGACTTTCTTCTTGGTATTGGGGAAGATAAACAACGCTCTGCCAGATTTACTGCCTGGTTCCATACACCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACAATCAGAAATTGCAATCCACAAGTTTATTACCGCCCCCTGTGCAGTCTTCTGAGAGTAAAAGTATCCGTCCACATGATGGACGTCTGCTACGGGTTTACACAGATATACCTCACGTGGAAGAGTACTTGACTCATCCTGAGTTTACAATCATAAAGGAACCAAAAGATGCAGATATAATATGGACATGTGTGCAGGTAGATGAGGAATTGAGGAAGGCCACAGGCTTAACAGATCAGCAGTATATTAATCAATTTCCGTTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCAGAAACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACTCATCTGGGTCAACTCATTGGTGACTATAACGCGCGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCTTGGAACATGGCCCGAACAATTGATACTACTGTAACTGATAATTTATCGGCCATAATCCGACTCATGGAAACTGGTCCAAAAATATGCCAAAAGTATATTGAACAGCCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTCCGTTACGTAGTACTGGTTCGGAGCATGCACCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTAAGGATAGCCAACAACCAATATTCTTTGGACAAAAGTAGTCTTTTTGAGTATGAAACTCATTTCACCGTTATGAATTATCGTGGAAGAATAAATCACAAGAATATTAAGGATTTTGTGAGGGAATTTGAGGAAGAACATAAAGTTAAGTGGTTGGATATACATACAAGAGTAAGGAATATGATTCGTTCAGTGTTTGAGGCAGCCGCGGTTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATTTACGGTGTAGATGTCATGTTAGACAGCTCTTTCCAACCTAAGTTACTAGAGGTAACTTACTGCCCTGATTGTACGCGAGCTTGCAAATATGACATGGATATCGTGGTTGGAGAAGGAGGTGTTGCCAAAGGTGTTGATTTCTTCAACAATGTGTTCAAGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGTCCATTGTAA 2622 0.4203 MVAMATPKRIKTYEDFAKVHAILLAASGLPEPLHRRLFQKLSTETFDGGEHFQIEPCEENRQRRLVLTSDSMAKDSNVFLIDHAWTFRLPDAYKQLREVPGLAERMSSLMCVDTDRNLDGETEVEGVGDEASREKADVVEVVESEVREAKEKGDGTLRWLELDSLDIDDDTLLSLDLPARFPDLVALSLYGNKLTRADLIVKEVIKFKHLKGLWLNDNPVLKNRDGEFADIILKELPELEIYNSTFTSNFGEWALGFCAEIYGKDSPTNADQADSPLLSVSNLDLSDRNIHNLTNKDFSPIYLPSLSYLNIHGNPLEQNSVANLLGLLRGFPCLHSLEVDIPGPLGGSAIEILESLPNISELNGISTSKILGTGKHVIDSVLLPRLPEWTHDEPIHDRIISAMWQYLMTYRLADEEKLDETSVWYVMDEFGSALRHSDEPNFRVAPFLFMPEGNLASAVSYSILWPTQNVWKGNECTRDFLLGIGEDKQRSARFTAWFHTPENYFIQEYEKHNQKLQSTSLLPPPVQSSESKSIRPHDGRLLRVYTDIPHVEEYLTHPEFTIIKEPKDADIIWTCVQVDEELRKATGLTDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLGQLIGDYNARKREGLDNLWILKPWNMARTIDTTVTDNLSAIIRLMETGPKICQKYIEQPALFQGKKFDLRYVVLVRSMHPLEIFLSDCFWVRIANNQYSLDKSSLFEYETHFTVMNYRGRINHKNIKDFVREFEEEHKVKWLDIHTRVRNMIRSVFEAAAVAHPEMHSPTSRAIYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGVAKGVDFFNNVFKCLFLNEISQVSPL 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08665 873 Gene3D - 664 850 - -
Vifa1g08665 873 ProSiteProfiles TTL domain profile. 537 865 IPR004344 GO:0036211
Vifa1g08665 873 Gene3D Ribonuclease Inhibitor 105 379 IPR032675 -
Vifa1g08665 873 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 650 831 - -
Vifa1g08665 873 Pfam Tubulin-tyrosine ligase family 591 841 IPR004344 GO:0036211
Vifa1g08665 873 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 4 872 IPR027749 -
Vifa1g08665 873 SUPERFAMILY RNI-like 157 371 - -
Vifa1g08665 873 FunFam Tubulin--tyrosine ligase-like protein 12 664 853 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08665 K16609 - gmx:100809212 1443.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08665 1 1367844360 1367850991 Vifa1g08665 1 1367844360 1367850991 ECH