Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08641 ATGGCTTCTAATATGAATAATCTTCCTCTCACCACAAAAAACCATTGTGTAACACTGACATCAACCTTAGTTCTAGCAGCCTTAGTTTCTCTCACAGTTCAAGTCTTCTACTTCTCCCCCATAGATCCACTTTTGTTTGAACCAACACCTTCTGTAATATCGTCATCCAAAAACAACCAATTACAGAATTTGATTAAACTCGGAGAAGGTTTTCTGAAGCAACCAGAAGATGTTTGTGTGGATAAAGAAGGTATTATCTATACAGCTACGCGAGACGGTTGGATTAAAAGAATGATCAAGAATGGAAACTGGGAGAATTGGAAGCATATAGATAGTCCTTCTTTGCTTGGAATCACAACAGCAAAAGACGGTGGTCTCATTGTCTGTGATGCTTCCATAGGTTTGCTTAAGGTTACAGAAGAAGATGGTTTCAGTGTTATTCTTTCACATGTTAATGGTTCTCAATTACTGTTTGCTGATGATGTAATAGAAGCATCAGATGGAAATATATATTTTAGTGTTGCGAGTACAAAATTTGGTTTACATAATTGGCATCTTGATGTGCTTGAGGCAAGACCTCATGGAAAACTTTTGAAGTATAACCCTATGTTGAATGAGACAGTTGTGGTTCTTGATGAGTTGGCTTTTGCAAATGGTGTTGCATTGTCTAAGGATGAAGATTATGTTGTGGTTTGCGAAAGTTGGAAATATAGGTGTGTGAGGCATTGGCTAAAAGGAATTAACAAAGGCAAAACAGATATCTTCATTGAAAACCTCCCTGGTGGACCTGACAATATCAATCTTGCTCCTGATGGCTCATTTTGGATCGCTTTGGTTAAACAATTTGCTTCTGAAAGACTGGGGTTTGTGCACACCTCTAAGGTGTCCAAGCACTTGGTAGCTTCATTTCCATGGCTATTTAATCTGATCAATGGAGTAACCAAGTCAGCAATGGTGGTAAATGTTGGAACTAAAGGCAATATTATCAGAAACTTTGGTGATCATGAAGGGAAGGTGATTAGTTTTTTAACTTCAGCTGTGGAGTTTGAGGACCATCTTTACCTAGGTAGTCTTAATACTGATTTTGTTGGGAAATTTCCACTGTCAAGTGCAAACTAG 1119 0.3816 MASNMNNLPLTTKNHCVTLTSTLVLAALVSLTVQVFYFSPIDPLLFEPTPSVISSSKNNQLQNLIKLGEGFLKQPEDVCVDKEGIIYTATRDGWIKRMIKNGNWENWKHIDSPSLLGITTAKDGGLIVCDASIGLLKVTEEDGFSVILSHVNGSQLLFADDVIEASDGNIYFSVASTKFGLHNWHLDVLEARPHGKLLKYNPMLNETVVVLDELAFANGVALSKDEDYVVVCESWKYRCVRHWLKGINKGKTDIFIENLPGGPDNINLAPDGSFWIALVKQFASERLGFVHTSKVSKHLVASFPWLFNLINGVTKSAMVVNVGTKGNIIRNFGDHEGKVISFLTSAVEFEDHLYLGSLNTDFVGKFPLSSAN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08641 372 Pfam Strictosidine synthase 164 246 IPR018119 GO:0009058|GO:0016844
Vifa1g08641 372 PANTHER STRICTOSIDINE SYNTHASE-RELATED 27 359 - -
Vifa1g08641 372 Pfam Strictosidine synthase-like, N-terminal 57 98 - -
Vifa1g08641 372 SUPERFAMILY Calcium-dependent phosphotriesterase 40 368 - -
Vifa1g08641 372 Gene3D - 56 371 IPR011042 -
Vifa1g08641 372 FunFam ABC transporter permease protein 60 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08641 Vifa-Chr1 1363362666 1363365108 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08641 - - mtr:11443676 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08641 1 1363362666 1363365108 Vifa1g08641 1 1363362666 1363365108 ECH