Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08558 ATGACTGCATCTAAGAAAAATCACAAAGACAAACCAGTTCGCCGCAAGGAAGAAAAACCGGAAGAACCAGAATTGCCGAAATACAGAGATCGAGCTAAGGAACGTAGAGAAGATCAAAATCCTGATTATGAACAAACTGAACTTGGGTTTCATGCTGTTGCTCCTCCTGGTACCGTTGATATTACGTCATCTGATGCGCATAAGTTATCCATTGAGAAGAGCAAGTACCTTGGAGGTGATGTGGAGCATACACATTTGGTTAAAGGTTTGGATTATGCTTTACTGAACAAAGTAAGGAGTGAAATTAAGAAGCCAGATGCTGGGGATGAAGGGGACGGGAAACCAAGAGTACCCAAGGAAGACCAGCAAGTGTCAATTCGCACAGCAACTGCTAAGTCAGTTTATCAGTGGATTGTCAAGCCTCAGACCATTAGCAAGACGAACGAGATGTTCCTTCCCGGTCGAATGACATTCATTTATAATATGGAGGGTGGATACCATCATGATATCCCAACAACCTTGCACCGTAGTAAAGCTGATTGTCTAGTGCCCGAGGAAATGGTTACAGTTAATGTTGATGGATCTGTTCTAGATCGCATTGCTAAAATTATGTCATACCTCCGTCTTGGCTCTTCTGGGAAGGTCCTAAAGAAGAAGAAAAAGGAAAAAGATGCTAAAGGGAAATTTTTGGCTGTCGGTAATGGATATGACAAAGAGGATAAGCTGGCAAAGGTTGAAAGTGTGGGGACAAAGAATCAAACAGAAAGAGAATCTATCCTTCCACCTCCACCCCCCTTGAAGAAAAATCCTATTATTTCAAGGGAGAATCAAGGTCCTGCTGTTGCAGCTGTTGCTAGAGAAGAAGATGATGACATTTTTGTTGGTGAAGGTGTTAACTATGAGATACCTGCTCCCCCGAGTCCTGTCTCTGAGGACATGGAAGAATCTCCTAGAAACAAAGAAAGACCTCAATATTTCACTGAACCTGTTTATGGCCCTGTCCCGCCTTCTATGATGGATCAAGGATGGCAAGAAACGAATGGATATGATGTAATGCAAACACAAGCCATGGTTGGTGGCTACCAAGGGCAATGGCAGGAGTATCAGTATGCTGAACAACTGGCTTACCCTGATCAATATCTTCAGCAAAATATGCAGGCTTATGATGTCCAGGCAGATTTAAATGTTGCACAAGATCCACGCTTTATGACTCAAGAAGAAAAGGACCGAGGTTTAGGATCAGTGTTTAAACGAGATGACCAGAGACTTCAGCAGCTGAGGGAGCAAGATGCCCGTGAGAAAGATCCTAACTTCATCTCGGAGAGTTACTCTGAATGTTACCCTGGGTATCAAGAATATAACCGCGAGGTAGTGGACAGTGACGAGGAAGCTGACTTGTCTAAAATGGATATGGGAGGAAGGGCAAAGGGTCGTCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCCACTTACAACGAGCAGAAGGAAGCAATGCCAAAAGCGGCATTCCAGTTTGGTGTGAAGATGCAAGATGGTCGGAAAACCCGGAAGCAGAACAAGGACCAGAAACTCAACAATGATTTGCATAAGATCAACAAGATACTTTCAAGAAAGAAGATGGATAAGGAAGGGAATGGTGAGGCTGGGCAATATGAAGATGAGCCCACCCCTGGAAAGAAGCTTCGAGTATGA 1698 0.4382 MTASKKNHKDKPVRRKEEKPEEPELPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDITSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIKKPDAGDEGDGKPRVPKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCLVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKEKDAKGKFLAVGNGYDKEDKLAKVESVGTKNQTERESILPPPPPLKKNPIISRENQGPAVAAVAREEDDDIFVGEGVNYEIPAPPSPVSEDMEESPRNKERPQYFTEPVYGPVPPSMMDQGWQETNGYDVMQTQAMVGGYQGQWQEYQYAEQLAYPDQYLQQNMQAYDVQADLNVAQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREQDAREKDPNFISESYSECYPGYQEYNREVVDSDEEADLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILSRKKMDKEGNGEAGQYEDEPTPGKKLRV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08558 565 MobiDBLite consensus disorder prediction 246 272 - -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 103 124 - -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 300 334 - -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 512 565 - -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 1 61 - -
Vifa1g08558 565 Pfam RED-like protein C-terminal region 443 550 IPR012492 -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 103 121 - -
Vifa1g08558 565 MobiDBLite consensus disorder prediction 1 44 - -
Vifa1g08558 565 Pfam RED-like protein N-terminal region 5 220 IPR012916 -
Vifa1g08558 565 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 5 552 IPR039896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08558 Vifa-Chr1 1348623275 1348630609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08558 K13109 - gmx:100526981 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g08558 1 1348623275 1348630609 Vifa1g08558 1 1348623275 1348630609 ECH