Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07991 ATGACCAAACCTGAAAGACCACCGTCAAGCCGCACCAACCTTGCCTCATGCGTCGTCGCCACCATTTTCCTAATCTTCATTTTCATCATCATCTTCACTCTCTACTTCACACTTTTCAAACCCCAAGATCCTAAAATCTCCGTCACCGCCGTCCAACTCCCCTCCTTCTCTCTCACAAACAACTTCACAACCGTTAATTTAACCTTTTCCCAATACGCTTCCGTTAGAAACCCTAACAGAGGAACGTTCTCTCACTACGATAGCTCCTTTCAGCTTCTCTGCTATGGAAGACAAATCGGTTTCATGTTTGTCCCCGCCGGGAAGATCAATGCGAGGAGAACGGAATACATGGCCGCCACGTTCACTGTTCAGTCTCTTCCGGTGGGGTTGGAGGGGAATGGTACTGATGGAGTTAATAGAGGTGGGCTGACGATGGAGATTGAGTCGACGATAGAGATGGCAGGGAGAGTGAGAGTGTTGAATCTGTTCAGTCATCATGTGGAGGCGAAAGCTGAATGCAGAGTCGCCATCGCCGTCGCGGATGGAACCGTCATAGGTTTTCACTGCTAA 570 0.4912 MTKPERPPSSRTNLASCVVATIFLIFIFIIIFTLYFTLFKPQDPKISVTAVQLPSFSLTNNFTTVNLTFSQYASVRNPNRGTFSHYDSSFQLLCYGRQIGFMFVPAGKINARRTEYMAATFTVQSLPVGLEGNGTDGVNRGGLTMEIESTIEMAGRVRVLNLFSHHVEAKAECRVAIAVADGTVIGFHC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07991 189 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 180 - -
Vifa1g07991 189 SUPERFAMILY LEA14-like 23 127 - -
Vifa1g07991 189 Pfam Late embryogenesis abundant protein 74 173 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07991 Vifa-Chr1 1248192138 1248192707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07991 - - psat:127120822 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07991 1 1248192138 1248192707 Vifa1g07991 1 1248192138 1248192707 ECH