Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07990 ATGGCCTCTGAGAAGGACTATTTTCACCTCTATGGACCCTTACATCTAACTTATGTGAATTGGGATTATGCATATCATCGAAAATCGGTAGCTGCTAGTTTGGTCCAAGGTGTTTACGTTTTAGAAAAAGATCGACAAAACCGACGGAAAGGTCCTGGTTCTATAGCATTTCCTTGGTGGACATTCTTCCATTTTGAACTGCTTCATACATTAGTAGATGATGTTGATAACTCCATATTTGGTGCAATTTATGAGTTCAAACATCCACCAGCAATGTGCCATGACGCGTTACATAGAAGTCCACGTTATGTAATTGCGTTCCGTGGAACTATAACCGAAGCAGACACAGTTTCACGCGATGTCGAGTTGGATCTTAAGTTTCTCAAAAATGGACTTCATCGATGTTCGCGGTCAGAGATAGCCGTCGGAGCTGTCAGAAACATGGTGGCTAGTGTTGGTGGAAATGGTTCAAATATATGGTTGGCTGGTCATTCTCTCGGATCAGGCATGGCTTTGCTTGCCGGGAAAGCAATGGCTAAAAATGGTATATTCATTGACTCTTTTCTTTTCAATCCTCCATTTGCATCTGCTCCAATTGAGAGAATTAAAAGTAAGAAAACGAAACATAGGCTTCGAATTGCGAGCAGCGTGATAACAGCCGGGATAGCCATTGCTATGCATTCAGATAAGAAAAGTTCATCATCCAGTGATTCATTTGCTGCTATGTCTGCTTGGATTCCATGCTTATTTGTGAATCCGTCTGATTATATATGTTCGGAGTATGTCGGATACTTTGAGCATAGAAGAAAAATGGAGGAGATTGGCGCGGGAAGCATTGAGAAGTTAGCAACACAAAACTCACTTGGTTCTCTCATGATGAATGCTTTTGGGAAGGAATCTGAACCTCTGCATCTCATTCCTTCAGCTATTTTGACAGTAAACTTTAGTCCTACACAAAGTTTCAAAGAAGCTCATGGGATTCACCAATGGTGGAAACCAGATTTACATTTGGAATCCAAGCTCCACAAATACTAG 1035 0.4126 MASEKDYFHLYGPLHLTYVNWDYAYHRKSVAASLVQGVYVLEKDRQNRRKGPGSIAFPWWTFFHFELLHTLVDDVDNSIFGAIYEFKHPPAMCHDALHRSPRYVIAFRGTITEADTVSRDVELDLKFLKNGLHRCSRSEIAVGAVRNMVASVGGNGSNIWLAGHSLGSGMALLAGKAMAKNGIFIDSFLFNPPFASAPIERIKSKKTKHRLRIASSVITAGIAIAMHSDKKSSSSSDSFAAMSAWIPCLFVNPSDYICSEYVGYFEHRRKMEEIGAGSIEKLATQNSLGSLMMNAFGKESEPLHLIPSAILTVNFSPTQSFKEAHGIHQWWKPDLHLESKLHKY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07990 344 SUPERFAMILY alpha/beta-Hydrolases 23 211 IPR029058 -
Vifa1g07990 344 Gene3D alpha/beta hydrolase 61 213 IPR029058 -
Vifa1g07990 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07990 Vifa-Chr1 1248105543 1248106750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07990 1 278 Acyl Lipid Metabolism Gene Families AT2G05260 50.173 2.95e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07990 - - gmx:100786952 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07990 1 1248105543 1248106750 Vifa1g07990 1 1248105543 1248106750 ECH