Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07964 ATGGGCATAAAAAATTTCATTATTTCCTCTATCCTAATCTCAACATTCTTCTTCTTTGTTCTTTACATTCCAACCAAAAAATTAACCACACCAATTACCTCAAACTTTTTCCCTCAAAATCCAACAATCCAAAACTTCAACATCTCAAACACAAACAAAACATATCCAATCACTTTTGCATACTTAATTTCAGGCTCAAAAGGAGATTCAATGAAGATCAAAAGATTGTTGAAGGCTTTGTATCATCCAGGAAACTATTATCTAATTCATATGGATCATGGTGCACCAAACAAAGACCATAGAGATTTGTTTGAATATGTGAGTAATGAAGGTCTTTTTGGTGAAGTTGGAAATGTTTGGATTGTGAAAAAAAGCAATTTTGTTACATATAAAGGTCCAACTATGCTTTCTACTACTCTTCATGCAATGGCTATTCTTCTTAGGACTTGTCAATGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCTTTGGTAACACAAGATGATCTGATACAAGGCTTTTCTGGGGTTCCAAAGGATATTAATTTCATTCACCATAGCAGTCATTTGGGTTGGAAATTCAATAAGAGAGGGAAGCCAATATTTATAGATCCAGCCCTTTATAGCAAAAAGAAATCAGAGATTTGGCAGGTTACAAAGCAAAGGAGTCTTCCAACAGCTTTTAAACTCTACACAGGTTCAGCTTGGACAATGCTATCAAGATCATTTGTTGAGTATTGCATCATAGGATGGGAAAATTTGCCAAGAACCCTACTTCTATACTACACAAATTTTGTGTCATCTCCAGAAGGATATTTCCAAACAGTTATATGCAACTCTAAACACTACAAAAACACAACAGCTAATAGTGATCTACACTACATTACTTGGGACAATCCTCCAAAACAACATCCAAAGTCTCTAACAATCAAAGATTATAAGAAAATGGTTTTAAGCAATCGTCCATTTGCTAGAAAGTTTAAGAAAAATGATAGTGTGCTTGATAAAATTGATAGAGAGCTTTTGAGAAGAAATCATGGACAATTTTCTTATGGAGGTTGGTGTTCCTCATTATCACAAAGTGGAAAGTATAGAACATGTCATGGTTTGAAAATTGAGAATTATGGTGTTCTTAAACCTAGTTTGGCATCAAAAAAGTTGAAAAGTATGCTCTCAAATATTCTTTCATTTAAGAATTTTCACAAACAACAATGTCGATAA 1224 0.3342 MGIKNFIISSILISTFFFFVLYIPTKKLTTPITSNFFPQNPTIQNFNISNTNKTYPITFAYLISGSKGDSMKIKRLLKALYHPGNYYLIHMDHGAPNKDHRDLFEYVSNEGLFGEVGNVWIVKKSNFVTYKGPTMLSTTLHAMAILLRTCQWDWFINLSASDYPLVTQDDLIQGFSGVPKDINFIHHSSHLGWKFNKRGKPIFIDPALYSKKKSEIWQVTKQRSLPTAFKLYTGSAWTMLSRSFVEYCIIGWENLPRTLLLYYTNFVSSPEGYFQTVICNSKHYKNTTANSDLHYITWDNPPKQHPKSLTIKDYKKMVLSNRPFARKFKKNDSVLDKIDRELLRRNHGQFSYGGWCSSLSQSGKYRTCHGLKIENYGVLKPSLASKKLKSMLSNILSFKNFHKQQCR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07964 407 PANTHER GLYCOSYLTRANSFERASE 11 406 IPR044610 GO:0015020
Vifa1g07964 407 Pfam Core-2/I-Branching enzyme 59 317 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07964 Vifa-Chr1 1241832013 1241843275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07964 59 407 Glycosyltransferase AT5G15050 56.571 2.03e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07964 - - gmx:100812712 600.512