Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07930 ATGGAGGATGGATTAGTAGAAAAAAATGAAAAAGTTGGTTGTATGAAAAAGGTGATTATAAAAAAGAAGAAAAATTATCATAGTAGCAAAGTTAAGAAGCCAATTTCAAATAAAACACTTCAGAAGCTATTTGTCTCATGCATGGAAACGTTCAAAGGACCTGGCACTGTTCCTTCAACAAAACATGTTCACAAACTATGCCACATTCTTGATAACATGAAGCCAGAAGATGTTGGACTAAGTAAAGATATACAGTTCTTCAAAGCAGAAAACAATGTGAAAGAAAATCCAAGAGTCACATACACAACCATATACAAATGTGACAATTTTTCACTATGTATATTTTTCCTACCTACAAATGGTGTGATTCCACTTCATAATCATCCAGGAATGACTGTTTTTAGTAAGCTTCTATTGGGAAAAATGCACATCAAGTCTTATGATTGGGTTGATCCTGATGTCTCTCACAATTTGTTGAACCAACCATCTCAATTGAGGTTGGCAAAGTTAAAAGCTAATAAAGTGTTCACATCACCCTGTGACACTTCGGTGTTGTATCCAAAAAGTGGAGGAAACATCCATGAGTTTACAGCCATAACTCCATGTGCTGTTCTTGATGTCATTGGACCTCCTTATTCTAAAGATGATGACAGAGATTGCTCTTACTATAAAGATCACCTTTACACTGCTTTTCCAAATGGAGAGATTGCTGAGTTGAAAGAAGAAAATGATAGCTATGCATGGTTAGAAGAAATTGAGATGCCTGAAAACTCTCAAATGGATGGAATTGAATATTTGGGTCCTCAAATTATAGAGACTTAA 822 0.3504 MEDGLVEKNEKVGCMKKVIIKKKKNYHSSKVKKPISNKTLQKLFVSCMETFKGPGTVPSTKHVHKLCHILDNMKPEDVGLSKDIQFFKAENNVKENPRVTYTTIYKCDNFSLCIFFLPTNGVIPLHNHPGMTVFSKLLLGKMHIKSYDWVDPDVSHNLLNQPSQLRLAKLKANKVFTSPCDTSVLYPKSGGNIHEFTAITPCAVLDVIGPPYSKDDDRDCSYYKDHLYTAFPNGEIAELKEENDSYAWLEEIEMPENSQMDGIEYLGPQIIET 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07930 273 CDD cupin_ADO 108 213 - -
Vifa1g07930 273 PANTHER UNCHARACTERIZED 40 270 IPR012864 GO:0016702
Vifa1g07930 273 Pfam PCO_ADO 69 270 IPR012864 GO:0016702
Vifa1g07930 273 Gene3D Jelly Rolls 33 233 IPR014710 -
Vifa1g07930 273 SUPERFAMILY RmlC-like cupins 38 225 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07930 Vifa-Chr1 1238768017 1238771572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07930 K23953 - gmx:100819405 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07930 1 1238768017 1238771572 Vifa1g07930 1 1238768017 1238771572 ECH