Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07849 ATGATGAGAGGTTCGAAGCGTTTGGCTGTATCGGAACCAAACCAGGCTAATACCAACGAAACGACGTTTCGTGATAAAAGAATAATGGAAGGATCTCTCTTTGATGTCCACAGGGCCGAACCATCCCAACAATTGATGGTGGCAACACCCCCATTGGATATGAAACGAGCAGAGTCTTCCCAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCGAGCTGGGTTCAAACACAGTTAAAGAATCACCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTGGATCATGCTACAGGCATTATGGAAAAATTTAGTGATGTTGTCAACTGGCTCAAAACAAATGCCAACAACAACCAACAACAACAACCAAGTCTTATCCCACCAAGTGGGTTTGGCCTCAAAGCAAATGCAACCAAGGCAGAGAATTCTACTTCCGGTGCTGGTTCCGTTGCTTCTTTAGCTGGGAAAAAGTTTTTGCCTGAAGTAACAAACAAAGAAAATAAGATTTTTGGAGAAAAAAATGAATCTCCTCCTATCAATACTACTACTACTACTACTACTACTACTACTACTACAAGTTTTGGTAGTTCATGGAGCCCTGGAATATTTTCAAACAATCAAAACATTTTTGCATTCGGAAATCAAAGTTCCGCCCCTTCCAACTCCAATCATAACGCTTCAGATGATGCGGATGCTGAAAACGACGAAGAGCAGCCCAGCAGCCCATCAGTGAAGAAGTCAGAAGAGAAAGGTGTTACAGTTGTACATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGACCCAACTGATAAGGATGTATGGAAAGATAAAGGAATGGGCCATCTGTCCATTAAATGCAAAGAGGGGGTTGCTAAGGCTACAAAAGAGTCCAAACCGACAATCATTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCTGGAATCAAGACAAGTGCACAAAAGAACTCTCTTGTTGCGATATTTCATACTTCGGGTAATGATGATGGTGGAGATAATGATAGTGTTGTTGCACGGACATTTTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACTATTCAAGAATATGCTCCAGTATCTTGA 1137 0.4142 MMRGSKRLAVSEPNQANTNETTFRDKRIMEGSLFDVHRAEPSQQLMVATPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHATGIMEKFSDVVNWLKTNANNNQQQQPSLIPPSGFGLKANATKAENSTSGAGSVASLAGKKFLPEVTNKENKIFGEKNESPPINTTTTTTTTTTTTSFGSSWSPGIFSNNQNIFAFGNQSSAPSNSNHNASDDADAENDEEQPSSPSVKKSEEKGVTVVHEVKCKLYVKSSDPTDKDVWKDKGMGHLSIKCKEGVAKATKESKPTIIVRNEVGKILLNALLYPGIKTSAQKNSLVAIFHTSGNDDGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07849 378 FunFam AT4g11790/T5C23_220 135 377 - -
Vifa1g07849 378 MobiDBLite consensus disorder prediction 212 228 - -
Vifa1g07849 378 SUPERFAMILY PH domain-like 247 375 - -
Vifa1g07849 378 Pfam RanBP1 domain 245 373 IPR000156 GO:0046907
Vifa1g07849 378 SMART ranbd_3 237 374 IPR000156 GO:0046907
Vifa1g07849 378 MobiDBLite consensus disorder prediction 175 200 - -
Vifa1g07849 378 PANTHER RAN BINDING PROTEIN 18 375 IPR045255 -
Vifa1g07849 378 MobiDBLite consensus disorder prediction 212 252 - -
Vifa1g07849 378 Gene3D - 162 377 IPR011993 -
Vifa1g07849 378 ProSiteProfiles Ran binding domain type 1 profile. 247 373 IPR000156 GO:0046907
Vifa1g07849 378 MobiDBLite consensus disorder prediction 169 200 - -
Vifa1g07849 378 CDD RanBD_NUP50 249 375 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07849 K14295 - gmx:100816975 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07849 1 1225371395 1225377752 Vifa1g07849 1 1225371395 1225377752 ECH