Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07834 ATGGACACGGCGGCACCACCGTCTTCTTCCCCATCGGAGGAGCCTCAGAATCAAAATCAACACCACGATCTTCAACATCAACTTCAACAAGAACAACAACAACTTTCTCCGGTGAAAGACTTTATTCACAAAACCAAAACGATTCAATTTCTCGGACGCACTACTCCGATCGTTCTTCAAAACGACAATGGACCTTGTCCTCTCCTCGCTATTTGTAATGTTCTTCTGCTACGAAACCAGTTAGGTTTAAGCCCGGATGTGGCTGAAGTCTCACAGGAGAAGTTGCTTTCATTGGTTGCCGAACGATTGATTGATTCAAATAGTGATGTGAATAACAAAGATGCAGGCTATGTCGAAAATCAACAGCAGAACATTTCTGATGCAATTGATTTGCTCCCTAGGCTTGCCACCGGAATTGATGTAAATCTAAAATTTACGAGAATAGATGATTTTGAATTCACTTCAGAGTGTGCCATATTTGATTTGCTGGACATCCCGTTGTATCATGGCTGGATAGTTGATCCGCAGGATCATGATACTGCAACTGCAATTGGATCGAAGTCCTATAATGCGCTTATGGGAGAGCTTGTTTCTCTTGAAACACGGAACATTGAAACCCTACCAAAAAACAACCCAGAAGAAGATTGTGTTGATTTTGTGGCCGCAACAACTGCTGCTCTTGGAGTTCCTTCTCCTAGTCTTTCGAAAGCTATGTCTTTTGATGATTCTCCACATTATGTTTCTGATCAGACACCAAGAAAAGGTGATCTTGAAGAAGAAGAACAGTTGTTGAGAGCCTTGAAGATGTCTGAAGTGTCAATGAGTGATCCTGTTGAGGGTCATGCAAATGATAACAAGGGAGAAGTTTCTTTTGGTACAGACGGAAATATGTGTAACAAACAGGCTGTAACCGTGGATTCTGAAGATAACTTAGGAAAGAACACTGGTAAAGAAAGCAACGACTACCATGAATCAGAAAGCTCCATACCTGATGTTTGCACTGCTTCTAGCAATGACTATAATGAACATACATCTTCCACATCTACACTGGGGGAAACAGCTAATTTGTCCTCAAAGAATGATGCCGTAAGTGGCTTCCATCAATTAACTTCTACGGGACCTGAAGAATCTATTAAACAAAATGATGTAGTCGAGAAGCACAACCTTGATGCATTGGTTCAGAATGAGAGTGTTGCCGTTCTTTCTCCTGAAAAATATTCCGTTTCTTTATTTGAGAACTGTGCTGATGGTTCTAGGGGGGATGAAAAAGTTCACAATCAATCCTCTCTTCTTACAACTATGGATCATGAAGTTTCAGATGAACCTCAAGGACTTGATGCAACAGGAGCACCATGCTTACCTGCAAGCCATACGAATTCAGATTCTTCTAATATCAGATTTCATCAAACTGATGCTTCTGGAGTATTCCCTTCAACTGTTGATAGGAGTGAGCCCTTGTACGAAGGAGAGGAATGTGTATTGGATACAAGAACTGGAATTGAGGAACGTGAACCTGTTTATGAAGGTGAGGCGGTGCTTCAGGAACAGGCTGACAAAAGCACCTTATCTTCCCTTGATCTAAGAGCTAAGGAAGAAATTACTCCAGAACAAGGAGAACATGCCAAGAATTTTTTGAGGAATAATGCCAGTCAATTGACATTTTACGGGCTTTTCTGCCTACAAGATGGTCTTAAAGAGCGTGAGTTATGTGTTTTTTTCCGAAACAATCATTTCAGCACCATGTTTAAGCTTGAGGGTGAACTTTATCTTCTAGCTACAGACCAAGGCTACATAAATCAACCTGATTTGGTTTGGGAAAAACTGAATGAGGTCAATGGTGATACATTGTTTATGACTGGCAATTTCAAGGAATTCAAGGTAGAAAGCAATGAAAATAACACCTGGGATGAGAACAATGTTATGACCAGCACTGCTGACTATCTTGCCAGCATAGATAGTGCAACACAGGGAGGCTTAGATATCAATTCTGATTTCCAACTAGCAATAGCCTTGCAACAACAAGAGTTTGAGCAGCAGCCACCACGTCATAATCAACAAACACCGTCCTCTAGTGGTAGTTCCAGATTGGTCACAGGCCCCCAGGTGGCAAGGAGCACTGTTAGGAATCCATCTTCATCTCCCAAGCCTGATGCAAAATCGAAAGAAAAATGTATAGTGATGTGA 2184 0.4148 MDTAAPPSSSPSEEPQNQNQHHDLQHQLQQEQQQLSPVKDFIHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNQLGLSPDVAEVSQEKLLSLVAERLIDSNSDVNNKDAGYVENQQQNISDAIDLLPRLATGIDVNLKFTRIDDFEFTSECAIFDLLDIPLYHGWIVDPQDHDTATAIGSKSYNALMGELVSLETRNIETLPKNNPEEDCVDFVAATTAALGVPSPSLSKAMSFDDSPHYVSDQTPRKGDLEEEEQLLRALKMSEVSMSDPVEGHANDNKGEVSFGTDGNMCNKQAVTVDSEDNLGKNTGKESNDYHESESSIPDVCTASSNDYNEHTSSTSTLGETANLSSKNDAVSGFHQLTSTGPEESIKQNDVVEKHNLDALVQNESVAVLSPEKYSVSLFENCADGSRGDEKVHNQSSLLTTMDHEVSDEPQGLDATGAPCLPASHTNSDSSNIRFHQTDASGVFPSTVDRSEPLYEGEECVLDTRTGIEEREPVYEGEAVLQEQADKSTLSSLDLRAKEEITPEQGEHAKNFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKLEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTGNFKEFKVESNENNTWDENNVMTSTADYLASIDSATQGGLDINSDFQLAIALQQQEFEQQPPRHNQQTPSSSGSSRLVTGPQVARSTVRNPSSSPKPDAKSKEKCIVM 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07834 727 MobiDBLite consensus disorder prediction 676 714 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 311 325 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 303 355 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 326 355 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 276 295 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 676 727 - -
Vifa1g07834 727 MobiDBLite consensus disorder prediction 1 34 - -
Vifa1g07834 727 Pfam MINDY deubiquitinase 72 196 IPR033979 GO:0004843|GO:1990380
Vifa1g07834 727 PANTHER NF-E2 INDUCIBLE PROTEIN 15 724 IPR007518 GO:0004843|GO:1990380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07834 K01309 - gmx:100808340 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07834 1 1223263242 1223269309 Vifa1g07834 1 1223263242 1223269309 ECH