Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07807 ATGGAAAGCAATGCTGGTACGTTGAAACAAGAAATTGTAACGATGGAAATAGAGAACGAAGGGTTTGGTGAAGATGAAATTGACTTGTGTTATGAGTTTGATGCTCCTTGTTTCTTTGATTTCACTGCACGAGAAACTCTGCTTCAGTCTCTCCAAGCTGAACGGTGGTTCAATACTGCAACAACATACGATCATTCCCCTGTTGTGGCAAATCTATTGATGACAGAGGAGGTTCCGGTAACAAAAAATACAACCATTGTTCATCATCCCAAACCTAATTTTCTTCAGCATTTTGGGATGACATTTAACAGCAACAAAATTGGCCAAGGTTTCAACTCTAAAACTAAATCTACTGTGATGAAGGGTCTATCAACGCTGATGAAACCTACTGCTAGTCAGTTGGCTAAGCAAAATCGGCCCCTTCAATTTGTTGGTTCAAGGTTTCAGAAGATACAAGCTCTTAAAAAGAAGATAAATGTAGCTAACTCTACTGTGGTAGAGAGTCAATCTGCCAAACGGCAGAAGTTAGAGGGTGGTCTCTTGCGCAAGGTTGGTGATGTGAAGCAGCAACCTAATTTTGTCCACAAGGCACCTAAGAAGATTGTAACTTCTGATCAAAACTGTGGACATTCCAAGCTTAATGCTACTCTTCCTAGAGTGTCTGGCCTAGAAACATCTTATACATCACAAAGGATTAGACCCAAAAATGGTGCAGAAGCAGAACTCACGACACGGGCTGTACACAAGTTCAAAGCACGGCCGTTAAACAGAAAAATTCTTGATGCTCCTTCATTACCAATTCCCAAAAGGACCCCTTTCCGGTTGCCAGAATTTCAAGAATTTCACCTCAAAACATCGGAGAGGGCCGTGCATCACAAATCTTCTACTTCATTATCTACACTTCCATGCAAAGATTCTGATCAGAATTTGGACAAACATGCTACTGCTTCTGCTCCACAAAATAGAATTTGGAATTTGAGAAGACCATCTGTGATGGATGCTCCAAAGAAAAGTGTATTGGACAGTAGGCATGAATTTAAAGCTCGGCCATTTAATAAGAAGATACTTTCAAGTAAAGGAGATATTGGTGTTTTCCGCAACATTAAGCAGGAAGCCACTGTGCCTATGGAATTTAATTTTCGTACAGAAAAGAGGCTTCAGCATAACCCACCAACGGATCTCTTTAGTAAGTTGTCACTAAGTGGAGACAAGCCAACTATGTTCAGCAAGGATTCAAAAGAAAATATGGGAACTTTTCATCTGGCCCAAAAGGTAAAACCTTTTATATTTGGAGAGAAGAAAATTCATAGTGGGAGCGAGGGTTGCATCAGTGGAGCTGGTACAGTATTGAATGCAAGGAGCTTGGGAATGCGGTAA 1377 0.4074 MESNAGTLKQEIVTMEIENEGFGEDEIDLCYEFDAPCFFDFTARETLLQSLQAERWFNTATTYDHSPVVANLLMTEEVPVTKNTTIVHHPKPNFLQHFGMTFNSNKIGQGFNSKTKSTVMKGLSTLMKPTASQLAKQNRPLQFVGSRFQKIQALKKKINVANSTVVESQSAKRQKLEGGLLRKVGDVKQQPNFVHKAPKKIVTSDQNCGHSKLNATLPRVSGLETSYTSQRIRPKNGAEAELTTRAVHKFKARPLNRKILDAPSLPIPKRTPFRLPEFQEFHLKTSERAVHHKSSTSLSTLPCKDSDQNLDKHATASAPQNRIWNLRRPSVMDAPKKSVLDSRHEFKARPFNKKILSSKGDIGVFRNIKQEATVPMEFNFRTEKRLQHNPPTDLFSKLSLSGDKPTMFSKDSKENMGTFHLAQKVKPFIFGEKKIHSGSEGCISGAGTVLNARSLGMR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07807 458 PANTHER TARGETING PROTEIN FOR XKLP2 26 402 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vifa1g07807 458 MobiDBLite consensus disorder prediction 289 321 - -
Vifa1g07807 458 Pfam Cell cycle regulated microtubule associated protein 214 380 IPR027330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07807 Vifa-Chr1 1219237634 1219241410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07807 - - tpra:123908520 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07807 1 1219237634 1219241410 Vifa1g07807 1 1219237634 1219241410 ECH