Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07804 ATGGCATCTATGAACGAAGATAACAATGTTAACGAAGAAGATGCTCGTGTAAAGGAGAAAGACCCATTGATTCAAACTTATAACAAAACCAACGACGGCAGTGGTGATTACATTGATTTGGTGACGCCCCACCGTGATTCTATACCGGAGACCACCGTTCCGGCTCCTCCACCACAACCACCACCTTTGTTGTATTGGGTTAAAATAGGGGTGCTTGTCCTGTGCTTTAGCGTTTTAGGTCTTGTTGTTTTCAATTGGGTTGGACCATTCTTCATTCAAAAGGTGTTTATTCCATTAATAAATTGGCAGGAAGAGACATTCACCACTAAGCAATTAGCTCTTATAGTGTTTGCTTCAATATCAATATTTCCTACCATACTTTTACCATCTTCGCCTTCTATGTGGTTTGCTGGAGTGATATTTGGTTATCTTTATGGTTTCTTGATAGTAATGTCTGCAGCAGTTATTGGAGTATCACTTCCTTTTTTAATTGGCTCAATGTTCCATCATAAGATTGAAGGTTGGTTAAACAAATATCCAAAGAAAGCTACTGTTTTAAGATCTGCTGGTGGAGGAAATTGGTTTCATCAGTTTAGAGCAGTTGCTCTAATAAGGATTTCTCCATTTCCTTACATACTTTATAACTATTGCTCTGTGGCAACAAATGTTCAATATGGTCCTTATTTGTGTGGATCTTTGGCAGGAATGACACCAGAAGTAATTGCTTCAATTTACACGGGAATTTTGATACGAGCATTGGCGGATGTATCACACAAAACAATTTTTCTATCTGCTCCACAGATTGCCTTCAATGTTGTTGGCTTCTGCATAGCTATAGGTACAACAGTATTTTTCACACTCTATGCTAAAAGACAGCTCGATCTGTTGCGGAGAGAAGATGAACTGCTATTGAAAAAACATCATTATGGCTCATTATATATTAACTGA 948 0.3819 MASMNEDNNVNEEDARVKEKDPLIQTYNKTNDGSGDYIDLVTPHRDSIPETTVPAPPPQPPPLLYWVKIGVLVLCFSVLGLVVFNWVGPFFIQKVFIPLINWQEETFTTKQLALIVFASISIFPTILLPSSPSMWFAGVIFGYLYGFLIVMSAAVIGVSLPFLIGSMFHHKIEGWLNKYPKKATVLRSAGGGNWFHQFRAVALIRISPFPYILYNYCSVATNVQYGPYLCGSLAGMTPEVIASIYTGILIRALADVSHKTIFLSAPQIAFNVVGFCIAIGTTVFFTLYAKRQLDLLRREDELLLKKHHYGSLYIN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07804 315 PANTHER EXPRESSED PROTEIN 12 301 - -
Vifa1g07804 315 MobiDBLite consensus disorder prediction 9 25 - -
Vifa1g07804 315 MobiDBLite consensus disorder prediction 1 30 - -
Vifa1g07804 315 Pfam SNARE associated Golgi protein 128 248 IPR032816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07804 Vifa-Chr1 1218912641 1218915431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07804 - - mtr:11436268 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07804 1 1218912641 1218915431 Vifa1g07804 1 1218912641 1218915431 ECH