Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07754 ATGGCACTTAATTCATTAACACCACTTTCAATTAATTCTCTTCATGTTTCTTCTTACCCTTCAAGTTCAAAGATTTCAAACACTCTTCATTTTCACTCAAAGTCCTCTCAAATTATCTCCAAAATTAATTCAAACAAGGTTACTAATGTAGAATCTAACAAGAAATGGAGGAAACTGTTTTCAGCAACATTGGCAGCTGCTGTTATTGTTTTCAGTTCTGACATGTCTGCCCTTGCTGATCTTAACAAATTTGAGGCTGAAATGAGGGGTGAATTTGGTATTGGATCTGCTGCACAATTTGGATCAGCAGATCTTAGAAAAGCTGTGCATGTGAATGAAAATTTCAGAAGAGCCAATTTCACATCTGCTGATATGAGAGAATCTGATTTTAGTGGTTCTACCTTCAATGGTGCATACATGGAAAAAGCTGTTGCATTCAAAGCAAATTTTACAGGTGCTGATTTGAGTGATACGTTGATGGATCGAATGGTTCTTAATGAAGCAAATCTCACGAATGCGATTCTTTCCAGAACAGTCCTCACACGGAGTGATCTTGGAGGCGCTGTCATTGAAGGTGCTGACTTTAGTGATGCTGTGTTGGATCTTCCACAAAAGCTGGCTTTATGCAAGTATGCTAGTGGCACAAATCCTGTAACAGGAGTAAGCACTAGAGTGAGTTTAGGTTGTGGGAACAAACGACGAAATGCTTATGGCCTCTGCGATTCAAAGTAG 732 0.3907 MALNSLTPLSINSLHVSSYPSSSKISNTLHFHSKSSQIISKINSNKVTNVESNKKWRKLFSATLAAAVIVFSSDMSALADLNKFEAEMRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRMVLNEANLTNAILSRTVLTRSDLGGAVIEGADFSDAVLDLPQKLALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGLCDSK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07754 243 Gene3D - 93 237 - -
Vifa1g07754 243 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 53 238 - -
Vifa1g07754 243 Pfam Pentapeptide repeats (8 copies) 98 137 IPR001646 -
Vifa1g07754 243 Pfam Pentapeptide repeats (8 copies) 165 200 IPR001646 -
Vifa1g07754 243 SUPERFAMILY Pentapeptide repeat-like 98 199 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07754 - - gmx:100805220 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07754 1 1210090856 1210092291 Vifa1g07754 1 1210090856 1210092291 ECH