Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07647 ATGGCTCGCAAGAGCATTGAACCGAACACGGTTCTAGTAAACCGCTTGATTCTTCTTTTTGTGTTTTTGGTTTCTTGCGGTTTGGCCTATCTTTTCTTCTCTGCTGTAACCAGAAGCGGTTCTTCTGTGTCGGAGTTTAGAACTGGGTCAACGTCGTCTTTTGCGGTAGTTGGTGAAAAAGGTGGAGGGTGTTGTAGAGGGATTGAAGATTTGGAGCTTTGGGGTTCAGCTGTGAAATGGGGTTCTGATTTCAAATTCAATACTTCTAAAGAATGTTGCAATGCTTGTAAAGCTATGTGTACTGGGAAAGATGGACCTTGTTTATGTGATTCTTGGGTGTTTTGTGGAAATCGTGAGACTTGTGGCTCCAAATTCGGTGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCCCCTGAACGGCAAGAAGAAGATCATTCTGTAGAGAAAATTACTTGGACTTCTGGTCTCATTTTTGGAAAAGGGGAGGGTATTATTGGGTTCGAAACTGGATACGGGACTATTCATATCAAACTTTTCCCTGACTGTGCTCCACACACGGTTGCCTATATTCTAGAATTGTTGCCTTTGCACCATTGTGCTGGCTGTGAATTATACCGTGCAGAGAGCCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAAAAAATGCTGGTTTCGGTCCCCCGTATGCATTAATTCAAGGGACATTAGAAGCACAAGGCACACCATTCCATAAACTTCCTTTAGAAGATTGTCCACTCTTAAAAAGAGGCTCAGTTGCTTTGATTGGTTCTGGTCCAGAATTCTTTATTAGCTTAGCTGATCATTCAGAATGGAAACAAGAATACACTGTTTTCGGCTCTGTTCTTCCAGAAGACATGAATGTTGCTGAGAAAATCGCTGCACTCCCCACCGTATCTGATGCTTGGAACAACGTTAACGTAACAGTTTTAAAAAAGCCTGTTCCTTTCTTGCTCAAAAGAATCAATAAAAGCAGCCAAGATTGA 1011 0.4214 MARKSIEPNTVLVNRLILLFVFLVSCGLAYLFFSAVTRSGSSVSEFRTGSTSSFAVVGEKGGGCCRGIEDLELWGSAVKWGSDFKFNTSKECCNACKAMCTGKDGPCLCDSWVFCGNRETCGSKFGECWLKKQKDSLAPERQEEDHSVEKITWTSGLIFGKGEGIIGFETGYGTIHIKLFPDCAPHTVAYILELLPLHHCAGCELYRAESRGQSWDSEGNHIKNAGFGPPYALIQGTLEAQGTPFHKLPLEDCPLLKRGSVALIGSGPEFFISLADHSEWKQEYTVFGSVLPEDMNVAEKIAALPTVSDAWNNVNVTVLKKPVPFLLKRINKSSQD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07647 336 Gene3D - 159 323 IPR029000 -
Vifa1g07647 336 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vifa1g07647 336 FunFam Predicted protein 161 324 - -
Vifa1g07647 336 SUPERFAMILY Cyclophilin-like 161 320 IPR029000 -
Vifa1g07647 336 PANTHER EXPRESSED PROTEIN 1 334 - -
Vifa1g07647 336 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 318 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07647 Vifa-Chr1 1187598294 1187601333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07647 - - gmx:100820360 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07647 1 1187598294 1187601333 Vifa1g07647 1 1187598294 1187601333 ECH