Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07584 ATGGCTTCTTCTGAGAATTCCATCCAAGACAGCAAGGGTTCTCTGACTGGACTTGCTCCACTTGAAGCAGTGCTCTTTGATATTGATGGAACTCTGTGTGATTCTGACCCACTTCATTATCTTGCCTTCCGTGAGATGCTTCAACAGATTGGTTTCAATGGAGGCAATCCTATAACAGAGGAATTTTTTATTGACACTGTTGCTGGCAAGCATAATAATGACATTGCCTTGGCTCTCTTTCCTGGTGAGCTGGAGAGAGGCTTAAAGTTTTTAGATGATAAGGAAGCCATGTTTCGGAGATTAGCAGCTGAGCAACTGAAGGCTTTAAATGGCCTTGATAAAGTGAGAAAATGGATTCAAGATCGTGGGTTGAAACGAGCTGCAGTTACCAATGCTCCAAGACCAAATGCAGAACTCACTCTCTCAAAACTTGGTCTCTCAGATTTCTTTCAAGCTGTTATTATTGGTGATGAATGTGAACATCCCAAACCTCATCCAGAGCCATACTTGAAAGGCCTTGAAGCTCTAAAAGCATCTAAAGATCACACGTTTGTATTTGAGGATTCTGTTTCAGGAATCAAAGCTGGTGTGGCTGCTGGGATGCCTGTTATCGGTTTATCTACCCGAAACCCAGAGCATTTGCTGATGGGAGCAAAACCCACCTTTCTGATTAAAGATTATGATGATCCAAAATTGTGGGCAGCTCTCGAAGAACTTGACAAGTGTGGTTCTCATTAA 738 0.4255 MASSENSIQDSKGSLTGLAPLEAVLFDIDGTLCDSDPLHYLAFREMLQQIGFNGGNPITEEFFIDTVAGKHNNDIALALFPGELERGLKFLDDKEAMFRRLAAEQLKALNGLDKVRKWIQDRGLKRAAVTNAPRPNAELTLSKLGLSDFFQAVIIGDECEHPKPHPEPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGLSTRNPEHLLMGAKPTFLIKDYDDPKLWAALEELDKCGSH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07584 245 Gene3D Putative phosphatase; domain 2 36 104 IPR023198 -
Vifa1g07584 245 Pfam Haloacid dehalogenase-like hydrolase 24 205 IPR041492 -
Vifa1g07584 245 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 21 229 - -
Vifa1g07584 245 NCBIfam HAD-IA family hydrolase 99 205 IPR006439 -
Vifa1g07584 245 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 22 240 - -
Vifa1g07584 245 Gene3D - 22 229 IPR023214 -
Vifa1g07584 245 SFLD Haloacid Dehalogenase 21 229 - -
Vifa1g07584 245 SUPERFAMILY HAD-like 19 238 IPR036412 -
Vifa1g07584 245 CDD HAD_BPGM-like 23 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07584 Vifa-Chr1 1177043194 1177044793 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07584 - - cam:101496926 441.81