Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07580 ATGGATGACATGCCTGGATATATGCGTTACTGCTTGAACACAGGGAAGCTGGTCTTTTTGGCAATTTTAGTCTCAGGAGGAATCGTGTTGCAAGTTCTGGCTTGTGCTTTGTATAATAATTGGTGGCCGATGCTTAGTGCGATAACTTATGTGCTTCTTCCAATGCCTTTGCTGTTCTTTGCTGGGTCTGATGGTTCTTCTATGTTTTCTGAATCTGATAATAACTGGGTGAATATTGCGAAGTTCTTGACAGGAGCCTCAACTCTCGGAGGCATTGCCATTCCGAGCATTTTAAAGCATGCTGGTGTGATCGGTTGGGCAGCCTTTGCAATGGAACTCTCTTCTTTCTTTGTGTTTGTGTTAGCCATATTGTGTTACCTGGGGATGAGTGAGGAAGATAGTTATTATAGTATGCTATGA 420 0.4286 MDDMPGYMRYCLNTGKLVFLAILVSGGIVLQVLACALYNNWWPMLSAITYVLLPMPLLFFAGSDGSSMFSESDNNWVNIAKFLTGASTLGGIAIPSILKHAGVIGWAAFAMELSSFFVFVLAILCYLGMSEEDSYYSML 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07580 139 Coils Coil 139 139 - -
Vifa1g07580 139 PANTHER LEPTIN RECEPTOR-RELATED 15 133 IPR007262 -
Vifa1g07580 139 Pfam Vacuolar protein sorting 55 17 132 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07580 Vifa-Chr1 1176935286 1176936107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07580 1 137 EF-hand Containing Proteins AT1G32410 68.841 1.16e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07580 - - mnt:21406097 229.565