Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07557 ATGAGTGGCATAGCATTGATACCCGCACCTTGTAACCTCCTAACTGCATCTTCTTCTTCATCATCCAAATTTCAAAAACCAATCACAACCAAAACTAGAGTCTCACTCAACAACGCAATTTCAATCTCTTCAGACCCCTTCGTTCTCGAACTCGCCGAAGCCTTAGAAGACTCCGTCCCAACGCCCCAACCACTCCACAACCTCCGAGAAGCTTCCTCCGAATCTCTCCTCTCATCCTCATGGCCTTCCCGCCGAGACGAACCCTTTCGTTTCACCGACCTCTCTTTCCTCCGCTCTTCCCAAATCCTCCCCGCCCCAATCCCAGCACCAACCCCAACCATAACGCCGTTCTCCACCTCCCAATTCCCCTGCCACGTCAGCATCGTCGATGGACACTTTGTGAGTTCATTATCTGAAATCTCGGAGTTTCCCGACGGGGTTTACGTTGGTAGTTTGTCGAATTTGAGTTCGAATTTGAATTCTATTGTTGCTGAAAGGGTTTTGGAATTGGTTTGTGGATTGGAAAATGGTGATTTGTTTTGGTCAATTAACGGTATGGGTGCTCCTGATTTGACGGTGGTTTATGTACCGGAGGGTTGTCGTCTTCAAACTCCGGTTCATTTGGGTTATTTTTCGTCGCAGGGTAGTAAGGATGGTTCAAATGCTTTGTATCTTTCGAATCCGAGGGTTTTGGTGGTGGTGGAGAAAGGTGGAGAGGTTGATATAGTTGAAGAGTTTTCAAATGATGAAGAGAATGAGAATGAGTGTTATTGGACTAATGCTGCTTTGGAAGTGGTGATTGGGGAAGGGGGTAAAGTTAGGCATTCTTATATTCAGACTCAGTCGCCTCTTGCTGCACACATCAAATGGACCTCGGTTCGACAGGAGTCATCCAGTACATATGAGCTTACAGAGGTAAGCACAGGAGGCAAACTAGGAAGGCATAATCTTCATATCAAACAACTAGGTCCGGAAACAGTGACAGAGTTATCAACTTTGCACTTGTCTGCGGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTTGATCATCCGAGGGGCTATTCTCGTCAGCTTCATAAGTGCATTGTGACTCATTCACAGGGACAAGCAGTTTTTGACGGAAATGTTAAGGTTAACAGATATGCCCAGCAGACAGATGCAGGACAGTTAACAAGAAGCCTTCTTCTTGAACCTCGTGCAACTGTAAATGTTAAACCAAATCTCCAAATCATCGCTGATGACGTCAAGTGTTCCCATGGAGCTGCAATAAGTGATCTAGAACAAAGCCAGCTCTTGTATTTCCAAGCACGCGGCATTGATTCAGAAACAGCTAGAAGGGTTCTAATATTTGCATTTGGAGGTGAAGTGATAGATAAGTTTCCTTATTCTTCTATTAGAGATAAAGTACGAAGTCAGATTAAAAGTTTATTGGATCCATCTTCCAAATGA 1455 0.446 MSGIALIPAPCNLLTASSSSSSKFQKPITTKTRVSLNNAISISSDPFVLELAEALEDSVPTPQPLHNLREASSESLLSSSWPSRRDEPFRFTDLSFLRSSQILPAPIPAPTPTITPFSTSQFPCHVSIVDGHFVSSLSEISEFPDGVYVGSLSNLSSNLNSIVAERVLELVCGLENGDLFWSINGMGAPDLTVVYVPEGCRLQTPVHLGYFSSQGSKDGSNALYLSNPRVLVVVEKGGEVDIVEEFSNDEENENECYWTNAALEVVIGEGGKVRHSYIQTQSPLAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPETVTELSTLHLSAGNQTQDLHSSLVFDHPRGYSRQLHKCIVTHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRVLIFAFGGEVIDKFPYSSIRDKVRSQIKSLLDPSSK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07557 484 SUPERFAMILY Stabilizer of iron transporter SufD 58 480 IPR037284 -
Vifa1g07557 484 Pfam SUF system FeS cluster assembly, SufBD 226 454 IPR000825 GO:0016226
Vifa1g07557 484 NCBIfam Fe-S cluster assembly protein SufD 190 470 IPR011542 GO:0016226
Vifa1g07557 484 Pfam SufBD protein N-terminal region 63 207 IPR045595 -
Vifa1g07557 484 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 19 482 IPR011542 GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07557 K09015 - gmx:100791104 582.408