Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07345 ATGGCGGATCAGAACCAAAAAGCTGAGATCTTTGAACTCAACAATGGAACCGTGCAGCTTCTCGTTACCAATCTCGGTTGCACTATCACCTCCTTCTCTGTACCCAACAAAGATGGTGTCTTATCCGATGTTGTTCTTGGTCTCGACTCTGTTGAATCCTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCGAACCGGATTAAGGATGGAAAGTTTAAACTTGATGGGGTTGAGTACTCTTTGCCTCTCAACAGACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGAGGTAATTGAATATAAAAAAGGCGAAACTCCTTCAATCACTTTTAAGTATGAAAGTCATGATGGAGAGGAAGGTTATCCTGGAGACATCACTGTTACCGCAACTTACACACTCACCTCAAGCACGACTCTGAGGCTCGACATGGAAGGAGTGCCTAAGAACAAGCCAACAATCATTAACTTAGCTCAGCATACCTATTGGAACTTAGCTGGCCATAACTCAGGCCATATACTTGACCATTCAATTAAGATATCGGCTAATCATGTCACTCCTGTAGATCAGAACACAGTGCCAACTGGCGAAATCATGCCAGTGAAGGGTACACCTTTTGATTTCACGGCCGAAAGGAGAATAGGCGACACCATTAATCAGGTTGGACTAGGATACGACCATAACTATGTCCTCGATTGTGGCGAAGAGAAAGCTGGTTTGAAGCATGCTGCAAAAGTTAGGGATCCATCGAGTTCAAGGGTACTTAACTTGTGGACGAATGCACCCGGTATGCAATTTTATACTGCAAATTACGTCAACAATGTAACTGGAAAAGGAGGCGCTGTATATGGAAAGCATGCTGGATTATGTCTTGAGACACAAGTATTCCCTGATGCGGTAAACCAGTCACATTTCCCGTCTGTTGTGGTTCGACCTGGCGAGAAATATCAACATTCTATGTTGTTTGAGTTTTCAATTGAATGA 1020 0.4382 MADQNQKAEIFELNNGTVQLLVTNLGCTITSFSVPNKDGVLSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKDGKFKLDGVEYSLPLNRPPNSLHGGNVGFDKKVWEVIEYKKGETPSITFKYESHDGEEGYPGDITVTATYTLTSSTTLRLDMEGVPKNKPTIINLAQHTYWNLAGHNSGHILDHSIKISANHVTPVDQNTVPTGEIMPVKGTPFDFTAERRIGDTINQVGLGYDHNYVLDCGEEKAGLKHAAKVRDPSSSRVLNLWTNAPGMQFYTANYVNNVTGKGGAVYGKHAGLCLETQVFPDAVNQSHFPSVVVRPGEKYQHSMLFEFSIE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07345 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Vifa1g07345 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Vifa1g07345 339 Gene3D - 1 339 IPR014718 GO:0030246
Vifa1g07345 339 CDD galactose_mutarotase_like 14 336 IPR047215 GO:0016853
Vifa1g07345 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa1g07345 339 Pfam Aldose 1-epimerase 11 334 IPR008183 GO:0005975|GO:0016853
Vifa1g07345 339 FunFam Aldose 1-epimerase 2 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07345 Vifa-Chr1 1132731238 1132733008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07345 6 337 Miscellaneous Gene Families AT3G47800 50.301 1.29e-110 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07345 K01785 - gmx:100776238 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07345 1 1132731238 1132733008 Vifa1g07345 1 1132731238 1132733008 ECH