Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07256 ATGTCAATATCACTCCTTTTCCTCTACATTCTCTTCTTCCCTTCCTACACGACTCTCCCTAATCCCATTCTCCCAACACCATCATCTCATCCAACAACATTAACTATCCCTTCATTCCAAGAACAATCTTATGTTAAAGGCTGTCCTTTATCTCTCTCAAATGAACTTTTCAATGGCATAAAAAATGCATGTAGTTCGTCAAAACACAGTAAACTCGACCATAGCCGATGTTGTCCCGTTCTTGCAGCATGGTTGTATTCTTCCTACTCTGCCACCGCTCTTAGAAACCACCCATCACCGTCGTCATCATCATTTGACATGCCTTTAGTGCCAGATGATTCAGAAACATGTGTGGATGGTTTGGAAAAGGCTTTGAAAGTTAGAGGAATTGAGATTGTAAATCCAAATGAGAGTTGTGATTTGGTGTATTGTTATTGTGGAATTAGGCTGCATCCTTTTAACTGTCCTGATTCATTTTCTGTAACCAAAAGAGGGGAGCTTGTTGGAGATCAAAGTGTTAGAAAGTTGGAAAAGAGTTGTTTGAGTAGTGAAAAAAACGTCAATGGCTTTCAAGGTCTTGAAGGGTGTTCTAAGTGCTTGAATAGTCTCTATTTGGTGAGTTTTTACAAAGTTTAG 636 0.3931 MSISLLFLYILFFPSYTTLPNPILPTPSSHPTTLTIPSFQEQSYVKGCPLSLSNELFNGIKNACSSSKHSKLDHSRCCPVLAAWLYSSYSATALRNHPSPSSSSFDMPLVPDDSETCVDGLEKALKVRGIEIVNPNESCDLVYCYCGIRLHPFNCPDSFSVTKRGELVGDQSVRKLEKSCLSSEKNVNGFQGLEGCSKCLNSLYLVSFYKV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07256 211 PANTHER GPI-ANCHORED PROTEIN 19 207 IPR040376 -
Vifa1g07256 211 Pfam SPARK 47 204 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07256 Vifa-Chr1 1121768001 1121768636 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07256 - - ahf:112756685 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07256 1 1121768001 1121768636 Vifa1g07256 1 1121768001 1121768636 ECH
Vifa1g07256 1 1121768001 1121768636 Vifa1g07252 1 1121725051 1121725686 PCT