Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07144 ATGGCTCACAATACATCATCTGATGATTCTGATAATGAAATTTCTACAAGAACTAAACTCTTTGAACATGAAAAATCTATACATGAAATTCTTGGAGGAGGAAAAGTGGCAGATATATTATTATGGAGGAACAGAAATGAATCTGCTGCACTTTTTCTTGGGATGACAGTGATATGGTTTCTATTTGAGATCCTTGAGTACAATTTTGTGACAATCATTTGTCAATTTTTCATCACCATGATGCTTGTGCTATACATTTGGTTCAAAGTTGGTGATATATTAAAATGGAAAATACCTGAGATACCAGAAATTAGTTTACAAGAGTCTTTCTTCAATGATCTTGCTTTCATTCTCTACAGAAGATTCAACCAGTTATTACCAATACTTTTCCATATTTCATGTGGCAGAAACCTACCACTCTTTCTTATGACCATTGTTTCCCTCTATATATTCTCTGTGATTGGAAGCTACTTCAGCTTTGTTAATCTTCTATACATCGGCTTTCTATGCATGCAAACATTGCCACTTGTGTTCGAACGGCGCGGCCAAGAAATTAACATTCTGTTTGAAGATATCATTCTAGTTCGTGTTACTTTGTGGGACAGGAGAGGTCGAGAGCCACATCATAATTTTAAAACCATCAACAAAGGACCTTATACCCATGGGACAAATGAGGTGTCGGTTTTGAGATGCAAAGTTATTTATAAGATGGTTGTTGAGTCGGGATTTGTAGGTGTTTTGATTTGA 747 0.3561 MAHNTSSDDSDNEISTRTKLFEHEKSIHEILGGGKVADILLWRNRNESAALFLGMTVIWFLFEILEYNFVTIICQFFITMMLVLYIWFKVGDILKWKIPEIPEISLQESFFNDLAFILYRRFNQLLPILFHISCGRNLPLFLMTIVSLYIFSVIGSYFSFVNLLYIGFLCMQTLPLVFERRGQEINILFEDIILVRVTLWDRRGREPHHNFKTINKGPYTHGTNEVSVLRCKVIYKMVVESGFVGVLI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07144 248 ProSiteProfiles Reticulon domain profile. 36 196 IPR003388 -
Vifa1g07144 248 PANTHER RETICULON 15 191 - -
Vifa1g07144 248 Pfam Reticulon 36 190 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07144 Vifa-Chr1 1102924912 1102927505 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07144 - - gmx:100809028 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07144 1 1102924912 1102927505 Vifa1g07144 1 1102924912 1102927505 ECH