Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07116 ATGGTAGGAGACATGTGTTTCCTCTACAAGGATATTCTTGTTATAAAGCCTCCCAAGAAATCCCCAATGTTGTTAAGGATGGCGGTTTTTATGTTTTCAATGGTCAGCGCTGTTTCAATCTTCTATGTATGTATAAAGCAGATAGGTATGGAAGCGAGGACTGCATTTACGGACTTCAAAGTAATTGGTAACCTTACTCATAGTAGAGTAAAACGAATGCATCCTCACATGCTACATTATCCCAAACCTTTATCCTTTAGCAGGAATGAGTGTGCTCCTAATCCTGTCATGTTTTTTGCAATATTGTCGAATCAGAGATCGGGGAGTGGATGGTTTGAGACCCTTTTGAATAGCCACACTAATGTGAGCTCAAACGGCGAGATATTTTCTGTTAGAGAGAGAAGGAAAAATGCTTCTTCCATTTTGAAGGCTTTGGATAAAGTATATAATTTAGACTGGCTCAATAGTGCTTCCAAGAACGAGTGTTCTGCAGCAGTTGGACTCAAGTGGATGCTTAATCAGGGATTAATGGAGCATCACAAGGAAATAGAAGATTACTTCAAGCATAGAAGCGTTTCTATCATATTTCTTTTCAGGAGAAACTTACTACGCAGACTGGTATCTATGCTAGCCAATTCCTATGATAGTCACGCCAAGCTATTGAATGGAACACATAAATCTCATGTACACTCTGCAGAAGAGGCTGATATTCTTTCAAAGTATAAGCCTATCATAAATTCTACATCATTGGTGGAGGACTTGAAGGACATGGAGATAAAATCTGCAAAGGCTTTACAATACTACAATAGCTCTCGGCATATGATCCTTTACTACGAGGATCTTATGAGAAATCACACTAAGCTAAAAGACGTGCAAGAGTTTTTAGGGTTGCCACAAATGGAGTTAACGAGCCGTCAGGTTAAGATACACAAAGGACCATTATCAGATCATATTCAAAACTGGGACGAAGTTAACAAAGCATTGACAGGAACTGAATATGAGAGTTTCCTTGAAGCTGACTATTAG 1026 0.3899 MVGDMCFLYKDILVIKPPKKSPMLLRMAVFMFSMVSAVSIFYVCIKQIGMEARTAFTDFKVIGNLTHSRVKRMHPHMLHYPKPLSFSRNECAPNPVMFFAILSNQRSGSGWFETLLNSHTNVSSNGEIFSVRERRKNASSILKALDKVYNLDWLNSASKNECSAAVGLKWMLNQGLMEHHKEIEDYFKHRSVSIIFLFRRNLLRRLVSMLANSYDSHAKLLNGTHKSHVHSAEEADILSKYKPIINSTSLVEDLKDMEIKSAKALQYYNSSRHMILYYEDLMRNHTKLKDVQEFLGLPQMELTSRQVKIHKGPLSDHIQNWDEVNKALTGTEYESFLEADY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07116 341 Gene3D - 98 327 IPR027417 -
Vifa1g07116 341 Pfam Sulfotransferase domain 101 301 IPR000863 GO:0008146
Vifa1g07116 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 338 IPR027417 -
Vifa1g07116 341 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 5 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07116 Vifa-Chr1 1099069321 1099073065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07116 - - gmx:100789437 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07116 1 1099069321 1099073065 Vifa4g02590 4 791371020 791373389 ECH
Vifa2g03563 2 1038136726 1038138301 Vifa1g07116 1 1099069321 1099073065 ECH
Vifa1g07116 1 1099069321 1099073065 Vifa1g07116 1 1099069321 1099073065 ECH
Vifa4g02590 4 791371020 791373389 Vifa1g07116 1 1099069321 1099073065 PCT