Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07101 ATGACTCCATCTTTTCTTCAACCTCATTGTTCCTTCCTCATCAACATCGTTCTCTTCCTCACACTCTTTTTAATCCCAACACAAGTCAATAGTGATGCTAAAAGCTACAAATCATGTGCACCTTTTACCTGTGGAAACTTCACCAACATTACATATCCATTTTGGAATATCAACGATCAACCAAGTTATTGCGGCCATCCAAACTTCACGCTCGATTGTCAGAAAAACAACTTGACTATTGACATCAACTCACAAAAGTTTCATATCATTGATATGAATCAAACATCACAACTCTTGAAGATTGCAAGGTTGGATTTATGGAGTTACGATGCTGCTAATGTCACTTCTTGTCCAAATACTAATGTGAGCTTGAATTTGGATTTCTTCAAGTACACTTCCAATGACGAGAATTATAATTTATTGTCCGATTGCGACCCTCTTCCTACTAATTCATATGGATCTCCTTTGAGTTCAGAAGTTTCTCAAGAGATTTCTTGCCTCATAGATAGTAAACCTCAAGATGCATATTTAGTATTAAATACTAAAATGGCGGATTTCACGAACCTAGAGTGTAAGAACAATATCAAAGTTTATGGGCCAAAAAGCTCTATTATAGAAGATTCTGATACAAGAGTGGTGAATGTTTTAAAGGAAGGGTTTGAGGTTGGGTGGAGTGTTGTGGAGGAAGATATATGCAATTATTGCAAGAAATATGGTGGGAGATGTGGATACAATACAACCAAAAATGCATTTATGTGTATTTGTCCTAATCAACTGTCTTTTGGTGATTGCGGATTTTGTCGCCAGAGTTCAACAACTGCTATTTGGCCGGATGAGTCGGGTTGCGTAGGATCCAAGTTGTTTAAATCTGCGACACCATCACCCCTATCAGAACCATCTTATGGAGGAACACCAGTGCAAGCATTAGGACCAGCTTTTGGTTCAGATTCGAAAAAGTCTCCTTACGCTTCGAGTATGTATTCTTCCTTCCCCTGA 996 0.3835 MTPSFLQPHCSFLINIVLFLTLFLIPTQVNSDAKSYKSCAPFTCGNFTNITYPFWNINDQPSYCGHPNFTLDCQKNNLTIDINSQKFHIIDMNQTSQLLKIARLDLWSYDAANVTSCPNTNVSLNLDFFKYTSNDENYNLLSDCDPLPTNSYGSPLSSEVSQEISCLIDSKPQDAYLVLNTKMADFTNLECKNNIKVYGPKSSIIEDSDTRVVNVLKEGFEVGWSVVEEDICNYCKKYGGRCGYNTTKNAFMCICPNQLSFGDCGFCRQSSTTAIWPDESGCVGSKLFKSATPSPLSEPSYGGTPVQALGPAFGSDSKKSPYASSMYSSFP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07101 331 MobiDBLite consensus disorder prediction 291 331 - -
Vifa1g07101 331 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Vifa1g07101 331 PANTHER OS01G0690200 PROTEIN 12 267 - -
Vifa1g07101 331 Pfam Wall-associated receptor kinase C-terminal 176 257 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07101 Vifa-Chr1 1096817014 1096818009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07101 13 265 Receptor kinase-like Gene Family AT5G38260 25.279 7.22e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07101 - - psat:127114885 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07101 1 1096817014 1096818009 Vifa1g07101 1 1096817014 1096818009 ECH