Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07039 ATGCCTCCTCTCAGCAAGCGATCTCGATCAGAGATCCAAAACCTTCAACCTCTCATGCCGATTTCCGATCATCATTCCAAAATCTCCCAATACGAACTCTCTAGAGAAGAAAGAATCCGCGAAAACCGCGAGAGAATGGGAAAATTGGGGATTTTCGATATCTCACTTTCCCTCAAGCTCAAATCAACCCCACCTTCGCGAAGATCTCCATCTAACCCTAAATCGCCTATTTCTCGTAATCTATCTGCCCCTTCTCGCCGATCTTCCAGGTTGCAGAATGTTGCTCCTATTAGTTACTCAGAAGCGCCACTGAAGCAAGAAGTGGGTGAGAAAAAGACTAGGGTTGTGATAAGAGAAGGTTCTAAGCCTGAGGTTTATACTGAAGAACATGAGAAGCTTTTGGGGAATACTGAGAGAACTTGGGAGCTTTTTGTGGATGGTGTTGGAAAAGATGGGAAAAGGATCTATGATTCTGTTCAAGGCAAAACATGTCATCAGTGCAGGCAAAAAACTCTTGGTCTTCGGACACGCTGTTGCGAATGCAACTTGGTCCAGGGGCAGTTTTGTGGAGATTGCTTGTACATGAGATATGGGGAGCATGTACTAGAAGCCCTGGCCAATCCAACTTGGAAGTGCCCGGCTTGTCGTGGAATTTGCAACTGTAGCTTATGCCGTAATGCTAAAGGATGGGCACCTACTGGATATCTATATAGAAAGGTAGTGCAGTTGGGTTACAAATCGGTTGCACACTACCTCATCCAAACCCGTCGCGCAGAAGATGTTGAGAAAAATGATGATACTTCCAACCCAGTTTCAGATACGGATGTTAAGAAAAATGATGTTTCCTATGCTCTTTCGGCTAAAAGGTCACTTCCCTTCTCTGATGCAGACAACAATGATAATAAGCTTGGACTAATGCAGTCTCCAACTGAAACTGATGGCGACGAGGTTGCTGCAAAGAGATTGTTGATTTTTCCTGATGAGCAAGTTCAGCTTGAAAAAGTCGAGGGTGGTTCGGATGCCCCTGATGAGCAAGTTCAGCTTGAAAAAGTTGAGGGTGGTTTGGATACGCATGATGAGCAAGTTCAGCTTGAAAAAGTCGAGGGCGGTTCGGATACCAGGAAGGTACTTGCTTCTTCCAGCAAACCAAGCCCAGACAGTGTTGCTGGAAGACTTAGGTCTAGGACAAAAAAGCAACGATGA 1203 0.453 MPPLSKRSRSEIQNLQPLMPISDHHSKISQYELSREERIRENRERMGKLGIFDISLSLKLKSTPPSRRSPSNPKSPISRNLSAPSRRSSRLQNVAPISYSEAPLKQEVGEKKTRVVIREGSKPEVYTEEHEKLLGNTERTWELFVDGVGKDGKRIYDSVQGKTCHQCRQKTLGLRTRCCECNLVQGQFCGDCLYMRYGEHVLEALANPTWKCPACRGICNCSLCRNAKGWAPTGYLYRKVVQLGYKSVAHYLIQTRRAEDVEKNDDTSNPVSDTDVKKNDVSYALSAKRSLPFSDADNNDNKLGLMQSPTETDGDEVAAKRLLIFPDEQVQLEKVEGGSDAPDEQVQLEKVEGGLDTHDEQVQLEKVEGGSDTRKVLASSSKPSPDSVAGRLRSRTKKQR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07039 400 MobiDBLite consensus disorder prediction 352 372 - -
Vifa1g07039 400 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 156 252 IPR018866 -
Vifa1g07039 400 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g07039 400 PANTHER OS05G0300700 PROTEIN 24 316 IPR040221 GO:0006355
Vifa1g07039 400 MobiDBLite consensus disorder prediction 352 400 - -
Vifa1g07039 400 MobiDBLite consensus disorder prediction 60 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07039 Vifa-Chr1 1088029284 1088031917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07039 K23408 - gmx:100791534 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07039 1 1088029284 1088031917 Vifa1g07039 1 1088029284 1088031917 ECH