Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06960 ATGAAAGTGAAGCAGGATTATTGTATGGTGATGAGAATCAATATTGACTGCAATGGTTGTTATAGAAAAGTGAAGAGAGCCCTTCTTGAAATGCCAGAGTTGGAGAGCCATTTTCTAGAGAAGAAGCAAACCAAGGTAATTGTGTGTGGGAGGTTCATCCCTCAAGATGTTGCAATCAAGATAAAGAAAAAGACTAATAGAAGAGTTGAGATATTAGAAATACAAGATTTGAGTGAAAACAATGAAGAAGTTGAAGAACAGAAACCAGTTCCTACTAGCCCTCAAAAACCAGTTGAAAGAAACATGTATGGTTTGATAGAAACAAAGAGAGAACTGCCTGCCCTCAACCATAGAGTTCACTACACAAATTGTTCTTTTTAA 381 0.3648 MKVKQDYCMVMRINIDCNGCYRKVKRALLEMPELESHFLEKKQTKVIVCGRFIPQDVAIKIKKKTNRRVEILEIQDLSENNEEVEEQKPVPTSPQKPVERNMYGLIETKRELPALNHRVHYTNCSF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06960 126 Coils Coil 67 87 - -
Vifa1g06960 126 MobiDBLite consensus disorder prediction 80 100 - -
Vifa1g06960 126 Gene3D - 3 79 - -
Vifa1g06960 126 PANTHER OS08G0431150 PROTEIN 3 100 - -
Vifa1g06960 126 SUPERFAMILY HMA, heavy metal-associated domain 10 71 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06960 Vifa-Chr1 1073970438 1073971128 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06960 - - tpra:123885163 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06960 1 1073970438 1073971128 Vifa1g06960 1 1073970438 1073971128 ECH