Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06955 ATGATGTCATCTTCACAAAGAGTACCCAAGTTAGGTTCCTTTCGCCACAGTTTCCTGGAGAGAAAAGAAAGGCTAGTATCCATGAAAGGGGGCGGTGTTGCCGGTGGTGGTTACTCTCAAATAGGTATCCCTTTACCAGAATCCGACGACGAGGATTTCTTCCCACGGCGGTGCTTTTCGTTTCGGAGATTCTCCGATGGGATCGTGGAGTTTTGGAAAGAAGTGAAGCGCGTGGCGGTGAGAGCGTGGGAAATGGGCGTGTCTGATCCGAGAAAGATAATATTCTCGGCGAAAATGGGGCTTGCTCTTATCTTGATTTCGCTGTTGATTTTTCTTAAACAACCGTTTCAAGATGTCGGTAGATATTCTGTTTGGGCCATTCTCACTGTTGTCGTCGTCTTTGAATTCAGCATAGGAGCAACTCTTAGCAAAGGGGTAAACAGAGGAATAGGGACTTTATCAGCTGGAGGACTTGCTTTAACATTGGGAATGCTATCAAATTTAGCTGGAGAATGGGAAGAAATTGTAATAATCATTAGCATCTTCATTGTAGGATTTTGTGCCACATACGCGAAACTATACCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGTTACATTACTGTATCTGGATATCGAACCGGGGAATTTATTCATACGGCTATAAATAGATTTTTGCTCATTGCCCTTGGTGCTGCTGTATCTGTCGGCGTAAATGTGGGCATATATCCAATCTGGGCCGGTGAGGATCTACATAATCTTGTTGCAAAGAATTTTACGGGCGTTGCGACATCAATAGAAGGTGTTGTAAATAACTACCTTAACTGTATTGAATACGAGAGGGTGCCGTCGAAAATTCTTACATATCAAGCTTCCGATGATGTAGTTTACAGTGGATATAGATCAGCTGTTGAATCTACAAGCAAAGAGGATTCATTGATGAGTTTTGCTATCTGGGAGCCACCTCACGGTCGGTACAAAATGTTTCGATATCCATGGAAGAATTATGTTAAAGTAAGTGGAGCGCTTAGGCATTGTGCTTTCATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCAGCGGATAAGAGACAAGTTTTCCGCAATGAGCTGAAGAAAGTAGGTTCTGAAGCAGCTAAAGTTCTACGCGAACTTGGCAACAGAGTTAAAAAGATGGAGAAACTAGGCCAAGAAGACATTCTTTTTGAAGTACACGAAGCAGCGGAAGAATTACAACAAAAGATCGACAAAAAATCGTTCCTTCTTGTAAATTCAGAACTTTGGGAAATCGGTAACAGACCAAGAAACGAAAGCGATTCTCAAGACCTCTTACAAATGGACGAAGAAAGTCATTTCTTGGAGTACAAGTCACTAAGTGAAGCTGTGCTGGATTTAAGTTCGGTTAGAGTTCCAAAAAGTTGGGAAGAAAATATTGCATGCGACAACGGCATTAAGCCTGCTAATGTTGTTACCGAAAAAATGTTGAGGAAACAAACATCTTGGCCTGCACATATTTCATTTCAAGGAGATGCAATGACAAAACAGGAAGAATCAAAAACATATGAAAGTGCTAGTGCACTAACTTTGGCAACATTCACATCACTTTTGATTGAATTTGTGGCTAGGTTACAGAACCTTGTGGATGCTTTTGAAGAGTTAGGCGAGAAAGCAAAGTTTAAGGATCCTCTTGAGCAACAACCACCTGTAACATCTGGTTGGAATAGGTTGTTTAAGTGTTTCAAATCTAAGGATTGA 1788 0.4133 MMSSSQRVPKLGSFRHSFLERKERLVSMKGGGVAGGGYSQIGIPLPESDDEDFFPRRCFSFRRFSDGIVEFWKEVKRVAVRAWEMGVSDPRKIIFSAKMGLALILISLLIFLKQPFQDVGRYSVWAILTVVVVFEFSIGATLSKGVNRGIGTLSAGGLALTLGMLSNLAGEWEEIVIIISIFIVGFCATYAKLYPTMKAYEYGFRVFLITYCYITVSGYRTGEFIHTAINRFLLIALGAAVSVGVNVGIYPIWAGEDLHNLVAKNFTGVATSIEGVVNNYLNCIEYERVPSKILTYQASDDVVYSGYRSAVESTSKEDSLMSFAIWEPPHGRYKMFRYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPADKRQVFRNELKKVGSEAAKVLRELGNRVKKMEKLGQEDILFEVHEAAEELQQKIDKKSFLLVNSELWEIGNRPRNESDSQDLLQMDEESHFLEYKSLSEAVLDLSSVRVPKSWEENIACDNGIKPANVVTEKMLRKQTSWPAHISFQGDAMTKQEESKTYESASALTLATFTSLLIEFVARLQNLVDAFEELGEKAKFKDPLEQQPPVTSGWNRLFKCFKSKD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06955 595 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 65 576 - -
Vifa1g06955 595 Pfam Aluminium activated malate transporter 83 565 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06955 Vifa-Chr1 1073303554 1073307089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g06955 10 573 Miscellaneous Gene Families AT3G18440 63.248 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06955 K25841 - gmx:100810157 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06955 1 1073303554 1073307089 Vifa1g06955 1 1073303554 1073307089 ECH
Vifa1g06955 1 1073303554 1073307089 Vifa1g06955 1 1073303554 1073307089 PCT