Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06941 ATGAAAGCTTCATCACACATTACTACTCCATTTGCTCTCATTTCACCCAACCAACTACTCAATGCAATCACTCTTGGAGATAAATATTTTGGTTTCAAATATAGCAAAGATAAGAGTATTGTAATGACAATGGTAGCCAAGGGATTAGGTAAAGGTGGTGGTTTGTTGGAGAAGCCTCCAACCATAGAGACAACATCACCTGGCCGAGAATCTGAATTTGATTTAAGGAAATCAAGAAAAACATCACCACCATACAGAGTAATGCTACACAATGACAACTATAATAAAAGAGAATATGTAGTACAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATTGCAGTTAACATCATGCAAGAGGCACATTATAATGGATTAGCAGTGGTCATTGTCTGTGCTCAAGTTGATGCTGAAGATCATTGCATGCAATTGAGAGGAAATGGCCTTTTAAGTTCAATTGAGCCAGCAGATGGTGGTTGCTGA 489 0.3804 MKASSHITTPFALISPNQLLNAITLGDKYFGFKYSKDKSIVMTMVAKGLGKGGGLLEKPPTIETTSPGRESEFDLRKSRKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNIMQEAHYNGLAVVIVCAQVDAEDHCMQLRGNGLLSSIEPADGGC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06941 162 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 38 162 IPR022935 GO:0006508
Vifa1g06941 162 Pfam ATP-dependent Clp protease adaptor protein ClpS 80 148 IPR003769 GO:0030163
Vifa1g06941 162 Gene3D - 79 157 IPR014719 -
Vifa1g06941 162 SUPERFAMILY ClpS-like 79 156 IPR014719 -
Vifa1g06941 162 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 79 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06941 K06891 - gmx:100785379 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06941 1 1071188942 1071190458 Vifa1g06941 1 1071188942 1071190458 ECH