Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06938 ATGGGATGTCAGTCCAGCAAGGGGACTAGTTTTAATGCCGATGTCCCAACACCAATTAAAATGGGCGCGCATTCTCTTTATGCGGCTGATTTAAGCTCTTACGAAGCTGCGTGTGTTGATGATCCGAACTTGCAATCCTTCGATGCAACCATTCAAGAGCGGACCAATAGGGTGATCAACTCTCTTGCTCAAGGGATCGAGGTTCATTCGATATCACTTGAGTCACTAGGTGAAGTTACTGGCAGTCTTCTTGACATGAACCTGGAAGTTGTCAAAGTCATTCTCGAGTCCAAGCAAGATATATGGAACAAGAAAGACCGCGACTTGTTCTCCTTGGTGGAGGATTTTTTTGATAATAGTCTCCAGACATTGGAGTTCTGTAATGCTCTTGAGAAATGCTTGAAACGAGCGCGCGGAAAACTTGTTGCGGTTAACTCTGCTATGACGTGTTTTGACGAAGAGGTTCAAAATGGGGGTGAAGGGTCGACTTATTTGAAGACATTGAAAGGTCTTAAGGATTTCAAGGAAACCGGAGACCCTTTTACCGAAGAGTTTTATTCTTTGTTTCAGAAAGTTTATACTCAACAATCATCAATGCTGAAGAAATTATTGATTACAAAGCAAAAGCTCGATAAGAAACTGAAATCTCTGAAAACATTGAAGAGGGTTTCAAGTGTTATCTTTGTAGCTGCTTTTGTTGCCGTGTTGATTTTCTCAGTAGTGGCAGCTGCAATCGCCGCACCCCCTGTTGTAACAGCTTTAGCCGGGGCACTGTCTGTTCCAATAGGCTCAGTTGGAAAATGGTGCAATTCGCTCTTTAAGAAATACGAGACAGCTTTAAAGGGCCAACGAGAAGTAATCAGTTCAATGCATGTTGGTACTTATATCACATTGGTAGATATGAACAACATTCGGGTACATATCGATCAACTGGAAATAAATATTGAGTCCATGACGCAAACTGTTGATTTTGCTCTTGGAAATGAGGATGCTGTAAAGCTAGCAATCGAGGAGATTAAGAAGAAAATAGAAACTTTTGCGGAGATTATTGAGAGTTTGAGTGTGCAGGCCGATCAATGTAGTCGACGGACTATGAGAGCGAGGACGGTGGTTGTACAAAAGATAATTAAATACTCTAGTTAA 1143 0.4173 MGCQSSKGTSFNADVPTPIKMGAHSLYAADLSSYEAACVDDPNLQSFDATIQERTNRVINSLAQGIEVHSISLESLGEVTGSLLDMNLEVVKVILESKQDIWNKKDRDLFSLVEDFFDNSLQTLEFCNALEKCLKRARGKLVAVNSAMTCFDEEVQNGGEGSTYLKTLKGLKDFKETGDPFTEEFYSLFQKVYTQQSSMLKKLLITKQKLDKKLKSLKTLKRVSSVIFVAAFVAVLIFSVVAAAIAAPPVVTALAGALSVPIGSVGKWCNSLFKKYETALKGQREVISSMHVGTYITLVDMNNIRVHIDQLEINIESMTQTVDFALGNEDAVKLAIEEIKKKIETFAEIIESLSVQADQCSRRTMRARTVVVQKIIKYSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06938 380 Coils Coil 336 356 - -
Vifa1g06938 380 PANTHER UPF0496 PROTEIN 3-RELATED 27 377 IPR007749 -
Vifa1g06938 380 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
Vifa1g06938 380 Coils Coil 200 220 - -
Vifa1g06938 380 Coils Coil 301 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06938 Vifa-Chr1 1071036814 1071037956 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06938 - - gmx:100819451 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06938 1 1071036814 1071037956 Vifa1g06938 1 1071036814 1071037956 ECH