Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06923 ATGGGAAAAGGAGGAGGCTGTGTTCCCAGCAAGAAAAAACAACCGCCGGTAGCCGAAGAATCTCCGCCGAGAGCCGCCACAGAATCCGAAGAATCTCCGCCGAGAGCCGCCACAGAATCCGAAGAATCAATCCGAGAAACACCGCTTACGGACGCAGCAAAACTCAAAATCTTCATCGTCTTCTACTCCATGTACGGCCACGTGGAAGGTTTAGCGAAGAGATTGAAGCAAGGCGTGGACGCCGTCGAAGGTGTGGAGGGAGTTCTGTACAGAGTACCTGAGACATTGTCGATTGAGGTCTTGAATCAGATGAAAGCGCTGCCGAAAGATGAAACTATTCCGGTGATATCGCCCGAGGAGCTTCCGGCTGCTGATGGTGTTTTGTTTGGGTTTCCGACTAGGTATGGCTCTATGGCGGCGCAAATGAAGGCTTTCTTTGATTCCACGGGGAGTTTGTGGCAGGGGCAGAAGCTTGCCGGGAAACCGGCTGGGTTCTTTGTTAGTACTGGTACTCAAGGTGGCGGTCAAGAAACCACCGCTTGGACGGCGATCACTCAGCTGGCACATCAAGGAATGCTGTTTGTTCCTATTGGTTATACATTTGGACCTGGAATGTTCAATTTGGATTCGATTAGAGGTGGTTCTCCATATGGTGCAGGAGTGTTTGCAGGTGATGGCACAAGAGAGCCAAGTGAAACAGAGCTCGCACTTGCTGAGCATCAGGGCAAATATATGGCTGCCATAGTCAAGCGGCTCGCTAAGTCCTGA 768 0.5143 MGKGGGCVPSKKKQPPVAEESPPRAATESEESPPRAATESEESIRETPLTDAAKLKIFIVFYSMYGHVEGLAKRLKQGVDAVEGVEGVLYRVPETLSIEVLNQMKALPKDETIPVISPEELPAADGVLFGFPTRYGSMAAQMKAFFDSTGSLWQGQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHQGMLFVPIGYTFGPGMFNLDSIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMAAIVKRLAKS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06923 255 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 56 252 IPR010089 GO:0003955|GO:0010181
Vifa1g06923 255 ProSiteProfiles Flavodoxin-like domain profile. 57 245 IPR008254 GO:0010181
Vifa1g06923 255 Pfam NADPH-dependent FMN reductase 119 196 IPR005025 GO:0016491
Vifa1g06923 255 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 56 254 - -
Vifa1g06923 255 SUPERFAMILY Flavoproteins 56 252 IPR029039 -
Vifa1g06923 255 Gene3D - 53 253 IPR029039 -
Vifa1g06923 255 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 53 254 - -
Vifa1g06923 255 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06923 Vifa-Chr1 1067664085 1067666382 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06923 K03809 - gmx:100807532 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06923 1 1067664085 1067666382 Vifa1g06923 1 1067664085 1067666382 ECH