Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06895 ATGAAGGATGACGATGGACTTCCAACCTCAACAACAACAAGTAGCAAAAAGGAAAACATGGATTCGTCGTTTCTCGGGAAAGGACGGTACAAATTCTGGGCATTAGCAGCGATTTTGCTTCTCGCTTTTTGGTCCATGTTCACCGGTACCGTTTCTCTTCGTTGGTCTGGGAATCTCAATTCGTTATCATCTGACCTAGATACCCCAATTCACGATGACCTAGATGTTCTCGAAATGGAGGAGAGGGAGAAGGTGGTGAGGCATATGTGGGATGTGTATACCAACAGCCGTAGGATCAGGTTGCCAAGGTTCTGGCAGGAGGCTTTTGAGGCTGCTTATGAAGAATTGACTAGTGATGTTCCTGGTGTTAGAGATGATGCAATTACTGAGATCGCTAAGATGTCTGTTCGTTCGGTTAATTTTGATCCGCCTCCTATTCAATCCACGAGAACACAAGAATTTAGCAAAACCCTCAAGATAGCTGAGAAAGGAAAAGAAGCCATTGCATCTCGGCGTGTTTAA 522 0.4483 MKDDDGLPTSTTTSSKKENMDSSFLGKGRYKFWALAAILLLAFWSMFTGTVSLRWSGNLNSLSSDLDTPIHDDLDVLEMEEREKVVRHMWDVYTNSRRIRLPRFWQEAFEAAYEELTSDVPGVRDDAITEIAKMSVRSVNFDPPPIQSTRTQEFSKTLKIAEKGKEAIASRRV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06895 173 PANTHER OS03G0411600 PROTEIN 1 166 IPR010608 -
Vifa1g06895 173 Pfam Protein of unknown function (DUF1195) 8 145 IPR010608 -
Vifa1g06895 173 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06895 Vifa-Chr1 1063087956 1063091319 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06895 - - gmx:100787922 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06895 1 1063087956 1063091319 Vifa1g06895 1 1063087956 1063091319 ECH