Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06889 ATGGCTACAGCAAAACACATTGCAAGAACATGGCTGATCTTATGTATCATTACTATGATCTGCAGTGTGAGTTTAGCAGAAAGAGTTTTGAAAGAAAAAGAAACAGGAAATCATGTTGAGAAAGAAACAAAAGGGTTTCTAAAAGCAATGGTTGATTTCTTATGGGACAGTGGAAAAGGTTCTTATGAACCTGTTTGGCCTGAAATGAAATTTGATTGGAAAATCATAGTTGGATCAATTGTTGGATTTTTGGGAGCAGCTTTGGGAAGTGTTGGAGGTGTTGGTGGTGGAGGAATTTTTGTTCCTATGCTTGCTTTGATCATTGGCTTTGATTCCAAATCTTCTACAGCCATTTCCAAGTGTATGATAATGGGTGCGGCATTGTCAACTGTTTACTACAATATGAGGCTTAGACATCCAGCGCTAGATATGCCGCTTATAGATTATGATTTGGCTTTGCTTTTCCAACCTATGTTGATGCTTGGAATAAGTATTGGAGTTGTGTGTAATGTCATGTTTGCTGATTGGATGGTCACAGTTTTGCTTATCATCATATTCATAGGTACATCAACAAAAGCATTATTGAAAGGCATAGATACATGGAAAAGGGAAACAATTATGAAAAAGGAAAAAGCCAAACAATTGGAAGAAGAACCAAAAACAGGTGAAGACTACAAGCCCCTACCAAGTGGTCCTGCTGGTACACAAGATGAAGTGGTCCCTTTGCTAAAGAACATTTATTGGAAAGAGTTATCACTCCTTGTGTATGTTTGGGTGGCTTTTCTCATTGTTCAGATTGTTAAGACATACACCAAGGATTGCTCCATTGAATACTGGATTCTTAATTTCTTGCAGGTTCCTATTGCTATCTCTGTTGCACTTTTTGAAGCTGTGTGTTTGTTCAAAGGAACAAGAGTGATTAAATCAAAGGGGAAGGAAATTACAAATTGGAAGGTTCATCAAATTTTGCTATATTGTGTTTGTGGAATTATAGCTGGTATGGTTGGAGGTTTGCTTGGTCTAGGAGGGGGCTTCATTTTGGGTCCGCTCTTTCTAGAAATGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCAACATTTTCTATGCTTTTTTCATCTTCCATGTCAGTAGTGCAATACTACTACTTAGATCGCTTTCCGGTACCTTATGCTTCATACTTTGTTTTAGTTGCAACCATAGCTGCTTTTACTGGTCAACATGTTGTGAGAAAGATAATTGCGATCCTCGGTCGAGCGTCCATTATCATCTTCATACTAGCATCAACCATTTTCATAAGTGCAATCAGTTTAGGTGGAGTAGGAATAGAGAATATGATTGTGAAGATGGAAAATCATGAGTATATGGGTTTTGAAAATCTTTGCACTCAATCTTAG 1395 0.3799 MATAKHIARTWLILCIITMICSVSLAERVLKEKETGNHVEKETKGFLKAMVDFLWDSGKGSYEPVWPEMKFDWKIIVGSIVGFLGAALGSVGGVGGGGIFVPMLALIIGFDSKSSTAISKCMIMGAALSTVYYNMRLRHPALDMPLIDYDLALLFQPMLMLGISIGVVCNVMFADWMVTVLLIIIFIGTSTKALLKGIDTWKRETIMKKEKAKQLEEEPKTGEDYKPLPSGPAGTQDEVVPLLKNIYWKELSLLVYVWVAFLIVQIVKTYTKDCSIEYWILNFLQVPIAISVALFEAVCLFKGTRVIKSKGKEITNWKVHQILLYCVCGIIAGMVGGLLGLGGGFILGPLFLEMGIPPQVASATSTFSMLFSSSMSVVQYYYLDRFPVPYASYFVLVATIAAFTGQHVVRKIIAILGRASIIIFILASTIFISAISLGGVGIENMIVKMENHEYMGFENLCTQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06889 464 Pfam Sulfite exporter TauE/SafE 326 432 IPR002781 GO:0016020
Vifa1g06889 464 Pfam Sulfite exporter TauE/SafE 68 188 IPR002781 GO:0016020
Vifa1g06889 464 Coils Coil 198 218 - -
Vifa1g06889 464 PANTHER CEREBLON 37 461 - -
Vifa1g06889 464 MobiDBLite consensus disorder prediction 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06889 Vifa-Chr1 1062083720 1062086209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06889 - - gmx:100801441 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06889 1 1062083720 1062086209 Vifa1g06889 1 1062083720 1062086209 ECH
Vifa1g06889 1 1062083720 1062086209 Vifa4g02477 4 746340141 746343013 PCT