Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g06782 ATGGCGATGGCTTCTATGGCATTTTGTGTGAACTCAGTGAGTTTTCAGAATCGTCGCCGATATAACAGTGGAATGGTATTTGCGAGTTTGGGAAACAAAGAAGCAGCTACTTTGGGAGTGAGGGTTACAGAAGGTGAGGGCAAATTGCCTAAACTCGTTCTATCTTCTCCGGCTGGTAGTGAGGCTGAGATATACTTGTTTGGTGGTTGTATTACCTCTTGGAAAGTTCCTAGTGGCAAAGACATTCTATTTGTTCGTCCTGATGCTGTTTTCAATAAGAAGAAACCAATAAGTGGAGGAATTCCACATTGCTTTCCGCAGTTTGGTCCTGGTGCAATTCAGCAGCACGGATTTGCGAGGAATTTGGATTGGACGGTTGGTGATTCTGAGAATCTGGAGGGAAATCCCGTTGTAACTCTGGAACTGAAGGATGATTCTTATAGTCGTGCTATGTGGGATTTCAGCTTCCATGCTTTATACAAGATCACACTAAATGCTAAAAGTCTTTCGACTGAGTTAAAAGTTAAAAATACAGACAATAAGGCATTCTCATTCAATACTGCCTTGCACACGTATTTTCGGGCTTCTGTAACTGGTGCATCAGTTAAGGGGTTAAAAGGTTGCAAAACACTGAACAAACATCCAGATCCTAATAATCCAGTTGAGGGCAGCGAAGAAAGGGATGTAGTCACTTTCCCAGGATTTGTAGACTGTGTTTATCTTGACGCTTCAAATGAGTTGGAGCTTGATAATGGATTGGGTGATATAATATCTATCAAGAACACGAACTGGTCAGACGCAGTGTTGTGGAATCCTCATCTTCAAATGGAAGCATGTTACAAAGATTTTGTATGCGTTGAAAATGCTAAGATTGGAAGTGTCCAGCTAGAGCCAGAACAAACTTGGACAGCTGTGCAGCATCTTACCATTGCATAA 936 0.4188 MAMASMAFCVNSVSFQNRRRYNSGMVFASLGNKEAATLGVRVTEGEGKLPKLVLSSPAGSEAEIYLFGGCITSWKVPSGKDILFVRPDAVFNKKKPISGGIPHCFPQFGPGAIQQHGFARNLDWTVGDSENLEGNPVVTLELKDDSYSRAMWDFSFHALYKITLNAKSLSTELKVKNTDNKAFSFNTALHTYFRASVTGASVKGLKGCKTLNKHPDPNNPVEGSEERDVVTFPGFVDCVYLDASNELELDNGLGDIISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGSVQLEPEQTWTAVQHLTIA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g06782 311 CDD D-hex-6-P-epi_like 51 309 IPR025532 -
Vifa1g06782 311 SUPERFAMILY Galactose mutarotase-like 53 308 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa1g06782 311 Pfam Aldose 1-epimerase 51 308 IPR008183 GO:0005975|GO:0016853
Vifa1g06782 311 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 45 310 - -
Vifa1g06782 311 Gene3D - 48 310 IPR014718 GO:0030246
Vifa1g06782 311 PIRSF PHexose_mutarotase 32 311 IPR025532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g06782 Vifa-Chr1 1046938151 1046940734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g06782 K01792 - gmx:100797902 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g06782 1 1046938151 1046940734 Vifa1g06782 1 1046938151 1046940734 ECH